Gene Slin_6189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6189 
Symbol 
ID8729972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7497059 
End bp7497430 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content46% 
IMG OID 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003390947 
Protein GI284041017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATAC GTGACCTTAC CAAAGCCGAA GAAGAGATCA TGCGGGTGCT TTGGCAGCTT 
CAGAAAGGCT TCGTCAAAGA TGTGTTAGCC GAACTGCCCG AACCCAAGCC CGCCTATAAT
ACCGTTTCGA CCATTATCCG TATTCTGGAG AAAAAGGAGC TGGTTGGTTA CCGCGCTTAT
GGAAAAACGC ACGAGTACTT TCCCCTGATT ACGGAAGAGG AATACCGTCG TTTCCAGACC
GAGCAACTTA TGGCGAACTA CTTCGATAAT TCGCTCAAAA AACTGGTGTC GTTTTTCGTG
CAGGACAAAA ACATCAGTCT GAGTGAAGCT GACGAAATTA TTAAGCTCCT AAACAAACAG
AAAGACCAAT GA
 
Protein sequence
MPIRDLTKAE EEIMRVLWQL QKGFVKDVLA ELPEPKPAYN TVSTIIRILE KKELVGYRAY 
GKTHEYFPLI TEEEYRRFQT EQLMANYFDN SLKKLVSFFV QDKNISLSEA DEIIKLLNKQ
KDQ