Gene Slin_6185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6185 
Symbol 
ID8729968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7489127 
End bp7491328 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content53% 
IMG OID 
Productpeptidase S9B dipeptidylpeptidase IV domain protein 
Protein accessionYP_003390943 
Protein GI284041013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCCAGTTTCT GACCCGGTTT CTCCTTGTTC TTGTTGCTCT TCCAGCCATC 
GGCCAAACCC GGAAGAATGT GTCGCTCGAT GACATTTGGG GTCGCAATCA GGGTGTATTT
GCCCAGCGTA CCGTTGAAGC GGTTAACTGG ATGAAAGCCG GTGGTTTTTA CACGACCCTC
GACGGTGGGA AAATCATGAA GTTTTCCATT ACCACCGGCG CAGCCGTAGA AACCCTCTTC
GATGCGCGGC AGGCAACCGT TTCAGGTACG ACAAAACGGG TTAGTGTAGA GGGGTACCAA
CTGTCGGCCG ATGAACGGAA GCTGCTCATC ACGACCCAGG AAGAACCCAT TTACCGGCGG
TCGAGTAAGG CTGAGTTCTA CGTCTATGAC CTGACTACCA AAGCGCTGAA GCAGTTGAGC
AAAGCGGGTA AACAGCAATA CGCTACGTTC TCGCCCGATG GCAAACAGGT GGCGTTCATG
CGTGAGAATA ACCTGTTTGT GGTTGATCTG GATACCCAAA AGGAAACCAA ACTCACCACC
GACGGCAGGC AGAATGCCAT CATAAACGGT GGCGCCGACT GGGTGTATGA AGAAGAGTTT
AGTATGGCGC GGGCTTTCGA ATGGTCGCCG GATAGCAAGC GGCTGGCCTG GATTCGGTTC
GACGAAAGCC GCGTTCCTGA ATATGACATG CAGCTTTGGG GCGGCTTGTA TCCGATAGAA
TACCGCTTCA AGTATCCAAA AGCGGGTGAA GCCAATTCAC GCGTGTCCGT TTGGGTAGCC
AATGTGCTCA CCGGTAAAAA AGTGCAGGCA CAAACGGGCA CCGAAACCGA TATATACCTG
CCCCGCATTC AGTGGACGAA AAACCCGGAA CTGCTGTCGA TTCGGCGTAT GAACCGGCTT
CAGAATAAGC TCGACCTGCT GCATGTAAAC GCAGCCACCG GACAAGCCAC AACGGTGCTG
ACCGAGACAA GCGCCACTTA CGTCGACCTG GAGTTTACCG ACGACCTGAC GTACCTTGCC
GATGGCAAGT CGTTTCTCTG GAGCAGCGAA CGCAGCGGCT ACAAACAGTT GTATCTGTAC
ACTATAAACG GCCAGCTTAT TCGGCCCATC ACGACCGGCA ATTTTGAGGT TTCCAGCGTA
TCGGGTGTGG ATGAGAAAAC AGGCACGATC TTTTTCACAT CTACCGAAAT GTCTCCGCTC
GAACGGCATC TGTACCGCAT TGGTCTGGAT GGGCAGAACA AACAAAAGCT GACTACCTTG
CCCGGTACGT ACACTACCAA TTTCAGCCCC GATTTTACTT ACTATCTACT GTATCATACA
TCGTCAAACG CGCCGGTGCG GGTTAGCCTG CGGGATACGA AAACAACCCG CGACCTACGG
GTACTCGAAT CGAACGACGA CCTGAAAAGC CGGTTAGCCG GTTATGCAAT CCAGCCAAAA
CAGTTCTTTC AGACCAAAGC GGCCGATGGT TCTCCGCTGA ATAGCTGGAT GATCCGCCCG
GCGAACTTCG ACAGTACGGG CACAAAAAAA TATCCGGTAC TGATGTTCGT ATATGGCGGT
CCGGGTTCGC AGACGGTGAA AAACGATTGG GATAGCCGTG ATTTTTTCTG GTACCAGACC
CTGGCTCAGA AAGGATACAT CATTGTATCG GTCGATGGAC GAGGTACGGG TGCCCGGGGA
GCCGCCTTTC GAACTGCTAC CTACGCCCAA CTCGGCAAAC TCGAAACCGA AGACCAGATT
TCCGCAGCCC GAAATCTAAA GACCCTGCCT TATGTTGACC CTGCCCGCGT TGGAATCTGG
GGGTGGAGTT ATGGTGGCTA CATGAGTGCG TTGTGCATGA CCCTTGGGGC CGATGTCTTC
AAAGCGGGTA TCTCCGTAGC TCCCGTAACG AACTGGCGGT TCTACGACAC CATTTATACC
GAGCGGTACC TCAAACGTCC GCAGGAGAAT GCATCGGGTT ACGACGATAA TTCGCCCGTT
ACGCACGCGG CCAAACTGCG CGGCCCATTT CTGCTCGTAC ACGGCACCGG CGACGATAAC
GTGCATTTCC AGAACTCCGT TGCGTTTGAA GATGCACTTA TTGCGGCTGG CAAGCAGTTC
CAGTCCTTCT ATTACCCCAA CCGGAACCAC GGCATTTACG GCGGCAACAC CCGCCTACAC
CTCTACCAAA TGCTGACGGA CTTTGTGGAG AAGAATCTGT AG
 
Protein sequence
MTAPQFLTRF LLVLVALPAI GQTRKNVSLD DIWGRNQGVF AQRTVEAVNW MKAGGFYTTL 
DGGKIMKFSI TTGAAVETLF DARQATVSGT TKRVSVEGYQ LSADERKLLI TTQEEPIYRR
SSKAEFYVYD LTTKALKQLS KAGKQQYATF SPDGKQVAFM RENNLFVVDL DTQKETKLTT
DGRQNAIING GADWVYEEEF SMARAFEWSP DSKRLAWIRF DESRVPEYDM QLWGGLYPIE
YRFKYPKAGE ANSRVSVWVA NVLTGKKVQA QTGTETDIYL PRIQWTKNPE LLSIRRMNRL
QNKLDLLHVN AATGQATTVL TETSATYVDL EFTDDLTYLA DGKSFLWSSE RSGYKQLYLY
TINGQLIRPI TTGNFEVSSV SGVDEKTGTI FFTSTEMSPL ERHLYRIGLD GQNKQKLTTL
PGTYTTNFSP DFTYYLLYHT SSNAPVRVSL RDTKTTRDLR VLESNDDLKS RLAGYAIQPK
QFFQTKAADG SPLNSWMIRP ANFDSTGTKK YPVLMFVYGG PGSQTVKNDW DSRDFFWYQT
LAQKGYIIVS VDGRGTGARG AAFRTATYAQ LGKLETEDQI SAARNLKTLP YVDPARVGIW
GWSYGGYMSA LCMTLGADVF KAGISVAPVT NWRFYDTIYT ERYLKRPQEN ASGYDDNSPV
THAAKLRGPF LLVHGTGDDN VHFQNSVAFE DALIAAGKQF QSFYYPNRNH GIYGGNTRLH
LYQMLTDFVE KNL