Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6148 |
Symbol | |
ID | 8729929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7454534 |
End bp | 7455226 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Deoxyribonuclease V |
Protein accession | YP_003390907 |
Protein GI | 284040977 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.184211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACTT ACCAGCCTCT TCACGAGTGG AACGTAACAC CCACCGAAGC CGTCATCCTG CAAAATCAGT TGCGTAATCA GATTAAGATT CAGCCTCTGA CAGAACCGCC TAAAACGATT GCGGGCTGCG ATATTTCGTT CAATAAGTTC GAAGAAACCG TGTATGCGGG TATTGTGGTG CTGCAACTGG ATACGCTCGA AACCATTGAA GAAGCAGGCG TGGTTAGTAC AGCCCCGTTC CCGTACATTC CGGGTTTGCT ATCGTTTCGG GAAATTCCGT CCCTGCTCGA AGCGTGGCAG AAACTCAAGA CCGAGCCCGA CGTGGTGATG TTCGACGGAC ACGGCACGGC GCACCCCCGC CGGATTGGGA TTGCCTCCCA CGCAGGCCTG TTCCTGAACC GGCCTACGTT TGGCTGCGGC AAATCGGTGC TGGTGGGTAA GTACGACGAA CCGGCACCGG AGCGCGGCAA CTGGTCGCCG ATGCGGCATT ATAACGAAGT AATTGGAGCC GCTTTGCGAA CGAAAAACAA GGTAAATCCG GTGTATGTAT CGCCAGGCAA TCTGATCGAT CTGGAAACGG CTATTTCGCT CACGTTGGCG TGTGACGGAG GCTACCGAAT CCCCGAACCC ACCCGCCGGG CGCATAATCT GGTGAACGCG ATCCGGCGGG GCGAACGCGT ATTTACCAGT TAA
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Protein sequence | MATYQPLHEW NVTPTEAVIL QNQLRNQIKI QPLTEPPKTI AGCDISFNKF EETVYAGIVV LQLDTLETIE EAGVVSTAPF PYIPGLLSFR EIPSLLEAWQ KLKTEPDVVM FDGHGTAHPR RIGIASHAGL FLNRPTFGCG KSVLVGKYDE PAPERGNWSP MRHYNEVIGA ALRTKNKVNP VYVSPGNLID LETAISLTLA CDGGYRIPEP TRRAHNLVNA IRRGERVFTS
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