| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6142 |
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| Symbol | |
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| ID | 8729923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7447445 |
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| End bp | 7450018 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003390901 |
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| Protein GI | 284040971 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.283964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTACT TGTTACTATC TCTTTTGCTG ATTTGTTCGT ATGCAAAGGC CAATATGCTG
CCCGACAGCA CCATTAGCCC GAAGGACTCT CTGCGAAAAA TTCAACTGGG TGAGATCGTC
ATTACAGCCT CGCGTATTCC TGAAAATGTG CTTAAATCGC CGGTGAGTAT CGAATTGCTC
GACGCCCGGC AGATTCGTCT GTCCGCTCAA CCTTCGTATT TCGACGCGAT TGAAAATCTA
AAAGGTGTTC AATTGTTAAC ATCCAGTTTA GGGTTCAAGG TGTATAACAC GCGCGGCTTT
GCCAACCCCA CCAATGTTCG ATTTGTTCAG CTTGTCGACG GCATGGATAA CCAGGCACCG
CATATTGGGG CACCAATTGC CAATGCGCTG GCTCCCTCCG ACCTCGACAT TCAGCAGGTA
GAGATTGTCC CCGGAGCCGC TTCGGCACTC TATGGCCTGA ACGCCCTCAA TGGTCTGGCG
CAACTGATCA CCAAAGACCC TTTTTCGTCG CCAGGCTTGA GTGTCAGCCA GAAAACAGCG
GTCAACCATG TCAATGATCC GCTGGTTTCG GCAAAAGTTT ACAGCGAGAC CAGCCTGCGT
TATGCCCGCA CAATCGGGTC GAGGCTGGCG GTTAAAGTTA ACGTTACCTA CCAGAGCGGC
TACGACTGGA TTGCCCGCGA CCAGTCTGAC CTGAATCCCA ATGCCAACAC CTCGCTGGGC
CTGACGGGAG CGAACAATCC CGGCAGCGAT CTGGTCAACA ACTACGGCGA TGAGTCGGCG
AACCGGCGAA CGCTGACGCT GGGCGGCAAA AAATATGTGG TATCCCGAAC GGGTTATTTC
GAAAACGACA TTACCGACCT GAGCCTTCGA AACCTCCGGG GCGATGTGGG CCTGTACTGG
CGTATTCGGC CGAACCTGAC CCTCTCCTAT CAGTACAAAG CTGCTACGCT CAACAACGTG
TATCAACGCA CCAACCGCTT TCGGCTGGAA AATTACCTAC TCGATCAGCA CGGCCTTACG
CTCACATCGC CCTCGGTACA GATCCGGGCC TATCGAACGC GCGAAAACAC GGGCGACTCC
TACAACATCC GCTCGATGGC CGAAAACATC GACAAGTCGT TCAAATCCGA CAACCAGTGG
TTTAGCGACT TTTCGAACCA GTTTACGAGC AGCACCGCAG CCGGACAATC CACAGTCGAC
GCCCTCCATA CGGCACGGAC CACAGCCGAT GCGGGTCGCC CACAACCGGG TTCAGAGACC
TTTAATCAGC AGGTGGATAA ACTCCGCGAC ATCAACAACT GGGATATTGG CGCGGCCCTG
CGGGTGAAAT CCTGGCTGTA CCATGCCGAA GCGCAGGTAG AACCCACCCG CGTTTTATGG
GCGGGTTTCC GGCAGAAAAC CGGCATCAAC CTGCTGGCGG GTCTGGACTT TCGGCGCTAT
GTGGTCTTCC CCGACGGCAA TTATTTTATC AACCCCGACA AAACCAGCAA TAACCTGATC
TATGGTAAAA CGGGTGGCTT TATGCAGGCA TCCCGCCAGT TTTTCGGCGA AAAACTAAAA
CTCAGCGGGT CGATCCGGGT CGACAAAAAC ACCTACTTTG ACCCGAAAGT TAATCCAAGA
ATTTCAGCGG TATTTTCGCC CGTCGAAAAC CATAACTTCC GGGCGTCGTA CCAAACGGGT
TACCGGTTTC CGTCGCTATT CGAGGCTTTT TCCAACGTCA ACTCCGGCGG GGTAAAACGG
GTTGGCGGGC TAAAGATCAT GTCGCAGGGA ATTTTTGAGA ACTCGTATCT GCGCACATCC
ATCGACGCCT TTCAGGCAGC CATCAACACC GATGTGAACA CCAATAAACT GACGACCGAT
CAGGCGATTC AGAAGAACAA AGGGCTGTTG AAGCCCAACA CCTATACCTA CCTGAAACCT
GAGCAGGTCA ACAGCGTTGA GGTTGGGTAC AAAGGGCTGT TTTTCGACAA AAAACTGTAC
GTAGACGTTG ATTTCTACTT TAACGTTTAC CGAAATTTCA TCGCGCAGGT AGAAGCCAAC
ATTCCCAGAG GCAAGAACCC CGATTCACTG GCCTATTACA TGGCCGACCG AAATCAGCAG
GACCGCTACC GGTTATGGAC CAACTCGAAA ACGAAAGTGT ATAACTATGG GTCGAGTCTG
GGGCTGCGGT ATTCAGCGGG CCGCGATTGG GTGATTTCGG GCAATGTCTC GCTGGCCAAG
CTGGACCGCA CCGACCAGGG CGATGGGCTG GAAGAAGCCT TTAACACGCC TAAATGGATC
ACAAACGTCG GCATTTCGAA TCCGGCTCTC TGGCAGAACG TAGGGTTCGC GCTCAATTAT
AAATACCAAA GTTCCTTCCT GTGGCAGTCG TCGCTGGCAA CGGGTGTTGT CCCCGCCATC
AACACCTTCG ACGCGCAGAT CAGCTACGCC CTCACCAATC TCGGCCGGTC GGCCAATTCG
CTGTCGTTTA AAATTGGGGG TACTAACCTG CTGAACAAGC CCTACACAAC CTTCACGGCC
GGGCCCAGCG TGGGTGGCTT TTATTACGTA ACCGTCGTAG CAACAGCGTT GTAG
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| Protein sequence | MHYLLLSLLL ICSYAKANML PDSTISPKDS LRKIQLGEIV ITASRIPENV LKSPVSIELL
DARQIRLSAQ PSYFDAIENL KGVQLLTSSL GFKVYNTRGF ANPTNVRFVQ LVDGMDNQAP
HIGAPIANAL APSDLDIQQV EIVPGAASAL YGLNALNGLA QLITKDPFSS PGLSVSQKTA
VNHVNDPLVS AKVYSETSLR YARTIGSRLA VKVNVTYQSG YDWIARDQSD LNPNANTSLG
LTGANNPGSD LVNNYGDESA NRRTLTLGGK KYVVSRTGYF ENDITDLSLR NLRGDVGLYW
RIRPNLTLSY QYKAATLNNV YQRTNRFRLE NYLLDQHGLT LTSPSVQIRA YRTRENTGDS
YNIRSMAENI DKSFKSDNQW FSDFSNQFTS STAAGQSTVD ALHTARTTAD AGRPQPGSET
FNQQVDKLRD INNWDIGAAL RVKSWLYHAE AQVEPTRVLW AGFRQKTGIN LLAGLDFRRY
VVFPDGNYFI NPDKTSNNLI YGKTGGFMQA SRQFFGEKLK LSGSIRVDKN TYFDPKVNPR
ISAVFSPVEN HNFRASYQTG YRFPSLFEAF SNVNSGGVKR VGGLKIMSQG IFENSYLRTS
IDAFQAAINT DVNTNKLTTD QAIQKNKGLL KPNTYTYLKP EQVNSVEVGY KGLFFDKKLY
VDVDFYFNVY RNFIAQVEAN IPRGKNPDSL AYYMADRNQQ DRYRLWTNSK TKVYNYGSSL
GLRYSAGRDW VISGNVSLAK LDRTDQGDGL EEAFNTPKWI TNVGISNPAL WQNVGFALNY
KYQSSFLWQS SLATGVVPAI NTFDAQISYA LTNLGRSANS LSFKIGGTNL LNKPYTTFTA
GPSVGGFYYV TVVATAL
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