Gene Slin_6135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6135 
Symbol 
ID8729916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7437671 
End bp7439287 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content52% 
IMG OID 
ProductBilirubin oxidase 
Protein accessionYP_003390894 
Protein GI284040964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.235032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTTG GGGTATTTAA CTACCTCAAC AAAAATTCAC CCCTCACCCA TAGGAATGCG 
CATGTCGTGT CGTCTAATCT GAATATGGGT AGCCTTATGG CTACAGCCAA CCGTTCATTT
TACCGCCCTA TCATGCAAAA AATCCTTACG CTCACTGTAT TTCTGGGCTT CTTGTTTGTC
ATCAGTTGTA GTAAACAGAG CGATACCAGT ATTACGCCAT CGGGAACGAC CAGTACCACA
ACCACTACGG GTACATCGAC CTATAATGAC CTCTGGATTC CGCCCACCCT CACCGGCACG
ACCTTTAACC TAACACTTGC CAAATCCACT AAACAACTGC GGACGGGCAC CGCAACCAAC
ACCTACAGCT ACAACAACAC ATCATTTTGG GGGCCCACCC TGATCATGAA CAAGGGCGAC
CTGGTGAAGC TGAACGTGAC CAACAACCTG GCGGAAGCAA CGACCACCCA CTGGCATGGT
TTCCATATTC CGGCCGTTAT GGACGGTGGC CCCCACCAGA TGATCGATGC CGGTACGACC
TGGTCGCCGT CGTTTGAGGT AAAAAACAAC GCGGGCACCT ACTGGTATCA CCCGCACCTG
CACGAAAAAA CAAAGGAGCA ATTGACCTAC GGAGCCGGTG GTCTGATCAT CATCAAAGAC
CCCATTGAAT CGGCGCTGGC CCTGCCCCGC ACCTATGGCG AAGATGATAT TCCGCTCATC
CTGACCAGCC GAAACTACAC ATCGACCAAC GCCTTCGACC TCTCGAACCG TGCCTATGGC
GATTATCAGC TGACCAACGG CACATCGAGC GCACAGGTCA GTTTGCCCAA GCAATTTGTG
CGGCTGCGCA TTCTCAACGC CGAAATTGAG CGTGGGTATA ACCTTGGCTT CAGCGACAAC
CGAACATTTT ATATTATCAC CAACGATGGG GGACTGCTGG ACACGCCGGT GCCCGTAACG
CGGGTAAAAA TGATGGTGGG CGAGCGCGTT GAAATACTGG TCAACCTCGG CAACGATGCC
GTTGGGTCAA GTCTGGACCT GATGGCCTAC AACGCCGGGC AGGCCTTTGG CTTTCCGGGT
GGTGAGCCGA ATACAAGCGG GGATTTTGGG AGTTTGCTGA ACAACAAGGA CTTTGCAGTG
CTGCATGTTA ACGTGAAAGC CACAACGCAA ACCGGCATTA CCGCCCTTCC GGCTAAATTG
ACCACAAACA CATACTGGAC AAATGCTGAC GTGACCAACA GCCGGACCAT CACCATCACC
GGCGGGCAGG GCGCTACGGC CTTTTCATTC GACAACAACC TCTACGGCGA AACGAAGATC
AACCACACGA TCAAGCTGAA TGCCATCGAG AAATGGACGA TTACCAACAA CAACATTTTC
GGGCACTCCT TCCATATTCA CGACATCCAG TTCAAGATTA TTTCGAGAAG TTCGGGCGCC
GTGGGCACGC ACGAATCGGG CTGGAAAGAC ACTGTTTTTG TACCCGTCGG TGAAAGCGTT
TCGGTTATCG CCAAGTTTGA TGATTTCGCC AGCAGCACCA ACGCCTTCAT GTACCATTGC
CACTTTTCGA ACCACGAAGA CGGCGGCATG ATGGGCCAGT TTCTGGTTGT TCAGTAA
 
Protein sequence
MLFGVFNYLN KNSPLTHRNA HVVSSNLNMG SLMATANRSF YRPIMQKILT LTVFLGFLFV 
ISCSKQSDTS ITPSGTTSTT TTTGTSTYND LWIPPTLTGT TFNLTLAKST KQLRTGTATN
TYSYNNTSFW GPTLIMNKGD LVKLNVTNNL AEATTTHWHG FHIPAVMDGG PHQMIDAGTT
WSPSFEVKNN AGTYWYHPHL HEKTKEQLTY GAGGLIIIKD PIESALALPR TYGEDDIPLI
LTSRNYTSTN AFDLSNRAYG DYQLTNGTSS AQVSLPKQFV RLRILNAEIE RGYNLGFSDN
RTFYIITNDG GLLDTPVPVT RVKMMVGERV EILVNLGNDA VGSSLDLMAY NAGQAFGFPG
GEPNTSGDFG SLLNNKDFAV LHVNVKATTQ TGITALPAKL TTNTYWTNAD VTNSRTITIT
GGQGATAFSF DNNLYGETKI NHTIKLNAIE KWTITNNNIF GHSFHIHDIQ FKIISRSSGA
VGTHESGWKD TVFVPVGESV SVIAKFDDFA SSTNAFMYHC HFSNHEDGGM MGQFLVVQ