Gene Slin_6131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6131 
Symbol 
ID8729912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7431959 
End bp7433962 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003390890 
Protein GI284040960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACC CCATGAACCG CTCAATTCTC CTTATTCTTC TCGCCCTCTC ACCACTTGTG 
AGTGTGGCCC AAACACCCGT TAAAAAACGG CCGATCAAAT CCAGCGATAT TTACCGCCTG
CAAAGCTTGA GCGACCCGCA GATTTCGCCC GATGGCAAAT GGGTGACGTA TGGCCTCTCG
ACCGTCGATA CAACCAAAGA CAAACGAAAT TCCGACCTCT GGATGGTAAG CTGGGATGGC
AAGGAAACCG TTCAGCTGAC CAACACGCCC GAAGGCGAGT CGAGAGCGCG GTTCAGTCCC
GATGGTAAAT ACATTTCGTT CGTGTCGGCT CGACAAGGCG CTACCAAAGG ACAAATCTGG
CTGATGGACC GCCGGGGTGG CGAAGCCAAA AAACTGACCG ACCTGAAAAC CGATCTGGAA
GAGTACGTCT GGTCGCCGGA TGGGAAAAAG ATAGCCATGG TTCTTCGTGA CCCCGACTAC
GCCGATTCGG CCAAGACCAA AGTCCGCAAG CCGTATGTGC TGGACCGCTA TCACTTTAAA
GCCGATGTGA AAGGCTATCT GGAAAAAGGC TCCGTACACC TGTATGTGTA TGATGTGGCC
TCCAAGAAAC TGGACACGCT CACCACGGGA AATTACGACG AAACATCACC CACCTGGTCG
CCGGATGGGT CACAGCTGGC GTTTGTCAGT AACCGGACGG AAGACCCCGA CCGGAATCAG
AACACCGACA TTTACGTCAT CGACGCAAAA AAAGGAGCCA CCATGAAGCA ACTGACCACC
TGGCCCGGCT CCGACAATAA CCCCGAATGG AGCCCCGACG GCAAACGCAT TGCCTACACA
CGCTCTACCG CATCGGGCAA CTTCCTGATG TACGATCAGC CCGTACTGGC CGTTATCAGC
CGCGACGGTG GCGAACCAAC TCTCCTTTCC AAAGCGCTGG ACCGGCCCGT TCGCAACCCA
CGCTGGGCGA AAGACGGACA GACTATCGGC GTACTGGTGC AGGACGACCG CCAAACGTAC
GTGGGTCAGT ATACGCTCGA TGGCAAGTTG GCCAAAGTTG CCAGTGGAAA TCGGGTATTT
ACGGAGTTGG AACCCGTAGC AAGCGGTAGT TGGCTCACGT TGATGAGTGA CCCCCAAACA
CCCGGCGAGT TGTATGCCAT TGAATCGGGC GCACCGCGTC GGCTCACACA TGTGCACGAT
GCATTTCTGG CCCCGCTCGA ACTGGCCACG GTAGAAGGAT TTACGTCGAA AAGCAAAGAC
GGTGCCCAGG TGTCTAATGT CTTGTACAAG CCAGCGAACG CAGCCGCCAA CAAGAAAATG
CCCACCATCT TCTTCATTCA TGGCGGCCCG GTTGCGCAGG ACGAGTTCAA CTTCGACCTC
ACCCGGCAAC TGCTGGCGGC CGGGGGCTAT GCCGTTGTAG CGGTCAATTA TCGCGGCAGC
AATGGCCGGG GGCTCGACTT TACCAAAGCC ATTTACGCCG ATTGGGGGAA CAAAGAAGTG
CTGGACATTC TGGGTGCCAC GGATTACGTC GTTGAAAAAG GCATTGCCGA CCCCGACCGG
CTGGGCATTG GCGGCTGGAG TTACGGCGGT ATTCTGACCA ACTACACCAT CGCCACCGAC
ACCCGGTTTA AGGCCGCGGC CAGCGGAGCG GGTAGCTCCC TGCAACTGTC TATGTACGGC
ATCGACCAGT ACACCAATCA GTATGAAACG GAGTTGGGCG CTCCCTGGAA AAACACCGAC
AAGTGGCTGA AGTTATCGTA CCCGTTCCTC AAAGCCGACC GCATTAAAAC CCCAACGCTG
TTTATGGCCG GCGAGAAAGA CTTCAACGTA CCAACGGCAG GTAGCGAGCA GATGTTTCAG
GCACTTCGGT CGCTGGGCAT ACCAACTCAA TTGATTATTT ATCCTGGTCA GTTTCACGGC
ATTTCGGTTC CCAGTTATCA AAAAGACCGC ATTGACCGGT ATCTGCAATG GTTCGACAAG
TATCTGAAGC CAAAAACAAT GTAA
 
Protein sequence
MTYPMNRSIL LILLALSPLV SVAQTPVKKR PIKSSDIYRL QSLSDPQISP DGKWVTYGLS 
TVDTTKDKRN SDLWMVSWDG KETVQLTNTP EGESRARFSP DGKYISFVSA RQGATKGQIW
LMDRRGGEAK KLTDLKTDLE EYVWSPDGKK IAMVLRDPDY ADSAKTKVRK PYVLDRYHFK
ADVKGYLEKG SVHLYVYDVA SKKLDTLTTG NYDETSPTWS PDGSQLAFVS NRTEDPDRNQ
NTDIYVIDAK KGATMKQLTT WPGSDNNPEW SPDGKRIAYT RSTASGNFLM YDQPVLAVIS
RDGGEPTLLS KALDRPVRNP RWAKDGQTIG VLVQDDRQTY VGQYTLDGKL AKVASGNRVF
TELEPVASGS WLTLMSDPQT PGELYAIESG APRRLTHVHD AFLAPLELAT VEGFTSKSKD
GAQVSNVLYK PANAAANKKM PTIFFIHGGP VAQDEFNFDL TRQLLAAGGY AVVAVNYRGS
NGRGLDFTKA IYADWGNKEV LDILGATDYV VEKGIADPDR LGIGGWSYGG ILTNYTIATD
TRFKAAASGA GSSLQLSMYG IDQYTNQYET ELGAPWKNTD KWLKLSYPFL KADRIKTPTL
FMAGEKDFNV PTAGSEQMFQ ALRSLGIPTQ LIIYPGQFHG ISVPSYQKDR IDRYLQWFDK
YLKPKTM