Gene Slin_6128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6128 
Symbol 
ID8729909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7428154 
End bp7429728 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content54% 
IMG OID 
ProductL-amino-acid oxidase 
Protein accessionYP_003390887 
Protein GI284040957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAA GAGACTTTAT TAATTCAACG AGTGCCAGTT ACGCCAGCCT ATTGGCTTGG 
GGAATGTTAC AGCCTGCACC CGCATCGGCG CTTGACTTAC CTGCCAATGG AAAGAAAAGT
GACGGTAAAG GTCGGAAAGT CATTGTTTTA GGTGCTGGTC TGGCCGGTAT GACGACCGCC
TATGAACTCG GCAAACTGGG TTACGACTGC ACCGTTCTGG AAGCCCGGTC GCGCTCGGGC
GGGCGTGTGT GGACTGTCCG GGGGGGCACT AAAGAAACCG AGCTGGCGGG CGGTACACCC
CAAACCTGTT CGTTCGAAAA CGGTCTTTAT TTTAATGGTG GAGCCGCCCG TATTCCGCAC
CACCACCAGA TTACCCTGCA ATACTGCCGT GAGCTGGGCG TACCCCTCGA AATCTTTAAC
GGTGCCAACG AATCGGCTTA CCTCTACAAT GACGGTGGTA CCGGCGATTT AGCTAACCGA
CGTATGCGCA TCAGCGATTA TCACTTCGAT ATGCGCGGCT ACACCGCCGA ACTGCTTGCC
AAAGCCCTCG ACCAGTCGTC GCTCGATCAG CAACTCACCA AAGAGGACGT TGAGAAACTT
ATCGATTTCC TGAAAAATGA AGGTGACCTA AACACGGCTC ACCTCTACAA GGGCACGAAC
CGACGGGGCT ACAAAGCAAA AAGTGATCCC GGTGCAGGCC ACACACCTGG CACCCTGACC
GATCCTTACG GCCTGACGGA TCTACTACGC TCGGGCTTCA TGCAGCCCGT TTTCTACAAC
GTGGGCGATT ACGCCTACGA ACAGCAGGCT ACGTTACTAC AGCCCGTTGG TGGAATGGAT
GCTATTCCGA GAGCCCTGGA GAAAAAGCTG ATCGGCAAAA TCCAATTCAA CGCGCCCGTC
AGTGAGCTTC GGAAAACCGA AAACGGTGTT CGGGTGGTGT ATCAGAAAGA CGGCAAGCCG
GTTGAGATTA CGGGTGAGTT CTGCGTATGT ACGCTGCCCC TTCCCATGCT CAAAAACCTC
GAATCCGACC TCTCCGGGAC GGTAAAACGG GCGGCCGACT TTGTGCCGTA CATGAAAACC
GGAAAGATTG GTCTTCAGTT TAAACGGCGT TTCTGGGAAG AAGATGATGG CATCTACGGG
GGCATTTCGC GCACCAACAT GGACATCAAT CAGATCTGGT ACCCATCTTT CGGCTTACAG
GGAAAGAAAG GCGTACTGAT TGGCTATTAT AACTTCTATA GCCGGGCCGA AGCCATTGGT
GCCTTACCCG TTGCCGAACG CGAAAAAATT GCATTGGCTC AGGGAGGGAA AATTCACCCG
CAGTATTCAT CGGAATTCGA AAATTCATTC TCCCTTGCCT GGCATCGGTT ACCATACAGT
GGTGGCGGCT GGGCGACCTA CGATGATGCC ACCCGCAAGA AATATTACCC GACCCTGCTC
GAACCGGACG GTAACATCTA CTTCGCAGGT GAACACACAA CCTACCTAAC GGCCTGGATG
GCCGGGGCCT TTACATCGGC TCGCCGAACC GTAGAAGCCT TACACGCCCG GGTCGGCGAG
TACACAAAAA AATAA
 
Protein sequence
MTRRDFINST SASYASLLAW GMLQPAPASA LDLPANGKKS DGKGRKVIVL GAGLAGMTTA 
YELGKLGYDC TVLEARSRSG GRVWTVRGGT KETELAGGTP QTCSFENGLY FNGGAARIPH
HHQITLQYCR ELGVPLEIFN GANESAYLYN DGGTGDLANR RMRISDYHFD MRGYTAELLA
KALDQSSLDQ QLTKEDVEKL IDFLKNEGDL NTAHLYKGTN RRGYKAKSDP GAGHTPGTLT
DPYGLTDLLR SGFMQPVFYN VGDYAYEQQA TLLQPVGGMD AIPRALEKKL IGKIQFNAPV
SELRKTENGV RVVYQKDGKP VEITGEFCVC TLPLPMLKNL ESDLSGTVKR AADFVPYMKT
GKIGLQFKRR FWEEDDGIYG GISRTNMDIN QIWYPSFGLQ GKKGVLIGYY NFYSRAEAIG
ALPVAEREKI ALAQGGKIHP QYSSEFENSF SLAWHRLPYS GGGWATYDDA TRKKYYPTLL
EPDGNIYFAG EHTTYLTAWM AGAFTSARRT VEALHARVGE YTKK