Gene Slin_6123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6123 
Symbol 
ID8729904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7422935 
End bp7423498 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content54% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003390883 
Protein GI284040953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCC TATCCGACCA GGCCTTGATT ACCCTATACC TAACCACTAA CGATAAGCAG 
TTCTTTGCGC AGCTATACAC CCGTCACCGC TATCGGGTCT ATCAGGTTTG TTTATGCTTT
TGCGAAGACC CTTACGAAGC TGACGACTTT ACACAGGAAA TCTTTATCCG GCTAACCCAT
AAAATCAACC GCTTCAGCGG TACCGCCCGG TTTACTACCT GGCTCACCAG GGTAACAACA
AACTACTGCA TCGACCAACT TCGGGACCGG CAACACCAAC AGGCACTTTT CCAGCGATAC
ACCAACGAAC TGGAGCGGCT CAACCACGGC TCGGCCGAGG CCGAGGAAAC CGCCTTGCAG
CTCATGCAGC GGGTGCTGCA CCAACTCTCG GCTTCCGAGC GGGAGTTGCT GGCCATCAAA
TATGCCGATA ACGTGACGCT CAAAAGCATT GCCCATAAAC ACAAGTTGAG CCTGAGTGCC
GTCAAGATGC GCATAAAACG CGCCCGCGAG CGAGCCCGTC TTCTCTACAG GCAGTTGCAT
GCACAGGCCG AACATAGCCT TTGA
 
Protein sequence
MAPLSDQALI TLYLTTNDKQ FFAQLYTRHR YRVYQVCLCF CEDPYEADDF TQEIFIRLTH 
KINRFSGTAR FTTWLTRVTT NYCIDQLRDR QHQQALFQRY TNELERLNHG SAEAEETALQ
LMQRVLHQLS ASERELLAIK YADNVTLKSI AHKHKLSLSA VKMRIKRARE RARLLYRQLH
AQAEHSL