Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6123 |
Symbol | |
ID | 8729904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7422935 |
End bp | 7423498 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003390883 |
Protein GI | 284040953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCCC TATCCGACCA GGCCTTGATT ACCCTATACC TAACCACTAA CGATAAGCAG TTCTTTGCGC AGCTATACAC CCGTCACCGC TATCGGGTCT ATCAGGTTTG TTTATGCTTT TGCGAAGACC CTTACGAAGC TGACGACTTT ACACAGGAAA TCTTTATCCG GCTAACCCAT AAAATCAACC GCTTCAGCGG TACCGCCCGG TTTACTACCT GGCTCACCAG GGTAACAACA AACTACTGCA TCGACCAACT TCGGGACCGG CAACACCAAC AGGCACTTTT CCAGCGATAC ACCAACGAAC TGGAGCGGCT CAACCACGGC TCGGCCGAGG CCGAGGAAAC CGCCTTGCAG CTCATGCAGC GGGTGCTGCA CCAACTCTCG GCTTCCGAGC GGGAGTTGCT GGCCATCAAA TATGCCGATA ACGTGACGCT CAAAAGCATT GCCCATAAAC ACAAGTTGAG CCTGAGTGCC GTCAAGATGC GCATAAAACG CGCCCGCGAG CGAGCCCGTC TTCTCTACAG GCAGTTGCAT GCACAGGCCG AACATAGCCT TTGA
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Protein sequence | MAPLSDQALI TLYLTTNDKQ FFAQLYTRHR YRVYQVCLCF CEDPYEADDF TQEIFIRLTH KINRFSGTAR FTTWLTRVTT NYCIDQLRDR QHQQALFQRY TNELERLNHG SAEAEETALQ LMQRVLHQLS ASERELLAIK YADNVTLKSI AHKHKLSLSA VKMRIKRARE RARLLYRQLH AQAEHSL
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