Gene Slin_6114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6114 
Symbol 
ID8729895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7409870 
End bp7410973 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390875 
Protein GI284040945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.513941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCAT TTCGTCACCA GGACAGCATC CTGGCAACGA AATCACCATT TTTTTACCGT 
CAAATCCGTA CCCCTATGTT CTCTAAACGT TTACTCAGTA CCCTGCTCAC CCTTGGTAGC
CTCTACTCCG CTCAGGCCCA GGACCCCGGC GTCGGCGGCT TCATCGTCTC CACGCCCCTG
GCCACCAATG CCGCCGGTAC CGTCAAGGTC AATGTGCTCA ACGGCTCCTC CACCCCCATC
CCCCAGGCCA ACAACGCCAC CTGGACCATC AACCTGCCCC CCAACATCGG CGTCACCGGC
AACAGCATCA GCCCCACGGC CGCCAACATC ACCACTACGG TGGGCACCTA CAGCCCAGTC
ACCGGCACCA TCGTCACCCT GGTCAGCAAT CTGGGGGCCG TGCCCGGCAA TGCCAACTAC
ACCCTGACGC TCAACGTTAT CGGCGTGGCA CCCGGCACCG ATGCACCCAT CAGCATCAAT
GCGGCCTCCA GCCCCCCCGT GGGCACCAAC ATCAGCGGCA ACGACAATGC CAGCACCACT
ATCACCGTCA CCGGGCCTCT GCCCGTGGGG CTAGTAACCT TCACCGCCCA GGCCCAGCCC
AACAAAAGCG TCTCCCTGGC CTGGACCACC GCCTGGGAAA CCAGCAACAA AGGCTTCCGC
ATCGAGCGCA GCAAGGACCT GATGACCTTC GAGACCGTGG GCGAAGTGAC CGAAGTGGCT
CCCGCCAGCA ACGGCCTCAC CAAGTACCAC CTCACCGACT TGACCCCTTT TATGGGCAGT
TCCTACTACC GGCTCACCCA AACCGACCTC TCGGGCAAAG CTACCGTTTA CCCCGCCATT
TCGGTGGTGA TTCGCGAGGA GGCCTATGGA GTATTCCCCA ACCCGGTGGT CAGCGAGGGG
AGCTTTATGC TGCGGCTGGA TGAACCCCAA ACCGCCATTC TAGGCTTCTA CAGCTCCCAG
GGATGCGCCC TGCCGTTGCA GAAAACGGGC TTTCAGGCCG GTAACCTGCT TTTAAAAACT
AACAGCCCCT TGCCCGCCGG GATCTACCTG CTCACGGTCC AGGAGCGGGG ACAAACCCGT
CAGCATCGAT TGGTAGTCCA ATAA
 
Protein sequence
MPPFRHQDSI LATKSPFFYR QIRTPMFSKR LLSTLLTLGS LYSAQAQDPG VGGFIVSTPL 
ATNAAGTVKV NVLNGSSTPI PQANNATWTI NLPPNIGVTG NSISPTAANI TTTVGTYSPV
TGTIVTLVSN LGAVPGNANY TLTLNVIGVA PGTDAPISIN AASSPPVGTN ISGNDNASTT
ITVTGPLPVG LVTFTAQAQP NKSVSLAWTT AWETSNKGFR IERSKDLMTF ETVGEVTEVA
PASNGLTKYH LTDLTPFMGS SYYRLTQTDL SGKATVYPAI SVVIREEAYG VFPNPVVSEG
SFMLRLDEPQ TAILGFYSSQ GCALPLQKTG FQAGNLLLKT NSPLPAGIYL LTVQERGQTR
QHRLVVQ