| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6109 |
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| Symbol | |
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| ID | 8729890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7405274 |
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| End bp | 7407430 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
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| Protein accession | YP_003390870 |
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| Protein GI | 284040940 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.403763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACT ACACTGTCGA CCAGCAGATT GCTATCATTT CGTGGGCGAT GACCTCCTCT
CCCATGAACG TTCTTAACGA CGAATCGATC CCGGAATTTG AAGCCGCCCT CCAACGTGCC
TTTACTGATG AGTCGGTGAA GGGCCTGATT ATTACCTCTG CCAAGCCTGA ATTCGTAGCC
GGTGCCGACC TCAAAATGAT CCTGCGCGCT AACGATAAGC CTCCCGCCGA GATGCTGAAG
GTCTCATCGG AGTTGAACCG GGTGTTCCGG AGCATCGAAA CGTCGGGCAA GCCTACCGTT
GCCGCCATCA ACGGTACGGC GCTGGGGGGC GGTTACGAAA TCTGTCTGGC CTGCCACCAC
CGCGTGGCTC TCAATAATCC AAAAACAGTT ATCGGTCTGG TTGAAGTAAC AATCGGTTTG
CTTCCGGGCG CGGGGGGCAC CCAGCGGCTC CCCCGTATGA TTGGTATTCA GGCCGCTTTA
CCGCTTATTC TGGAAGGTCG GAAAGTGAGC GTTCAGGAAG CCAAAAACCT CGGTATGATC
GACGACATTG CCGACACACC CGACGAGATG ATGGCCCAAG CCCGCGCCTG GATCGACGCC
AACGGAACGT CTGCCGGGCA AAAACCCCTG AAGCCCTGGG ACGAGATTGA TCGGAAGACG
GGGAAGATCG TTGGGAAAGA CAACTTTAAG GTGCCGGGCG GCAACGTCCA AAGCCCCGTT
GGTGCCCAGA CGTTTGCGGC TGGAACGGCC ATGCTCATGG ATAAAACCAA GGGTAACTAC
CCCGCCCCCC TCGAAATCAT GGCTTGTGTG TACGAGGGTC TGCAAGTCAA TATCGACCGG
GCACTAATGA TCGAAGCGCG GCATTTTGTG AAGGTGGCGA CCTCAAAAGT GGCGAAGAAC
CTCATCCAGA CGATGTTTCT GGGTATGAAC GAAGCCAACA AGGGAGCCAG CCGTCCGAAA
GATTACCCAA AAACTGACGT AAAGAAGCTG GGGATTCTCG GTGCGGGCAT GATGGGCGCG
GGCATCGCTT ATGTATCCGC TCAGACCGGC ATTGAGGTTA TCCTGAAAGA CGTATCGGTC
GAAGCGGCCG AAAAAGGCAA AGACTATTCC CGAAACCTGC TTAAAAAAGG CGTTGAACGC
GGCAAAGTCG ACCCGGCGAA AGTAGACGGC ATCCTGAACC TGATCAAACC CACTGCCGAT
GTGCAGGACT TGCAGGGTTG CGACCTCATT ATTGAAGCCG TCTTTGAAAA CCGGGAGTTG
AAAGCGCAGG TAACCCGGGA AGCCGAACCC ATGCTGGCAG AGAACGGGCT GGGTGTCTTC
GGTTCCAACA CTTCCACCCT GCCCATTAGC GGACTGGCGC AGGCATCGGG CAAGCCGGAG
AACTTTATTG GCATTCACTT CTTCTCGCCC GTTGATAAGA TGATGCTTGT GGAGATTATC
ATGGGCCAAC AAACGTCGGA TTATGCGCTG GCCGTCGCCA TCGATTTCAC CCGCAAGATT
CGAAAAACAC CAATCGTTGT CAATGATGCC CGAGGCTTTT ACACCTCCCG CTGTTTCAGT
ACGTATTCAT CGGAAGGAAT GGAATTACTG AAAGAGGGAG TCAACCCCAT TCTGATCGAG
AATGCCGGAA AAGACGCCGG AATGCCCGTT GGCCCACTCG CCGTTACGGA CGAAGTTGCC
CTGGATCTGG TCTATAAAAT TACCGGACAG GGAATTAAAG ACGGGGCCGT TCGCGAAGAC
GACACCAGTT ACCAGGTTGC CAGGACGTTC GTTGAACTGG GCCGAACCGG TAAAAAGGCC
AAAGCCGGGT TTTACGATTA TCAGGATGAC CGAAGCAAGA AGTTATGGCC GGGTTTGCAG
GACCTGTTCC CACAGGCCGA GCAGCAGCCT ACACTCGATG AAGTAAAAAC GCGTTTGCTC
TACCGGCAGG CCATCGAAGC TGTCCGCTGC TTCGAAGAAA ACGTGGTACG GACAAAGCTA
GATGCTGATC TCGGTTCCAT TCTGGCCTGG GGTTTCCCGG CTTATACGGG TGGGGCCGTA
TCGTTTGTGG ATTTCGTGGG TGTCGATACG TTCGTTAAAA CGCTGGACCG CCTAGCCGAT
CAGTACGGTG ATCGGTTCCT CCCAACGGCG GCCCTGCGCG AACGGGCACA AGTATAA
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| Protein sequence | MINYTVDQQI AIISWAMTSS PMNVLNDESI PEFEAALQRA FTDESVKGLI ITSAKPEFVA
GADLKMILRA NDKPPAEMLK VSSELNRVFR SIETSGKPTV AAINGTALGG GYEICLACHH
RVALNNPKTV IGLVEVTIGL LPGAGGTQRL PRMIGIQAAL PLILEGRKVS VQEAKNLGMI
DDIADTPDEM MAQARAWIDA NGTSAGQKPL KPWDEIDRKT GKIVGKDNFK VPGGNVQSPV
GAQTFAAGTA MLMDKTKGNY PAPLEIMACV YEGLQVNIDR ALMIEARHFV KVATSKVAKN
LIQTMFLGMN EANKGASRPK DYPKTDVKKL GILGAGMMGA GIAYVSAQTG IEVILKDVSV
EAAEKGKDYS RNLLKKGVER GKVDPAKVDG ILNLIKPTAD VQDLQGCDLI IEAVFENREL
KAQVTREAEP MLAENGLGVF GSNTSTLPIS GLAQASGKPE NFIGIHFFSP VDKMMLVEII
MGQQTSDYAL AVAIDFTRKI RKTPIVVNDA RGFYTSRCFS TYSSEGMELL KEGVNPILIE
NAGKDAGMPV GPLAVTDEVA LDLVYKITGQ GIKDGAVRED DTSYQVARTF VELGRTGKKA
KAGFYDYQDD RSKKLWPGLQ DLFPQAEQQP TLDEVKTRLL YRQAIEAVRC FEENVVRTKL
DADLGSILAW GFPAYTGGAV SFVDFVGVDT FVKTLDRLAD QYGDRFLPTA ALRERAQV
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