| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6094 |
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| Symbol | |
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| ID | 8729875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7389139 |
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| End bp | 7391586 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Glycogen debranching protein-like protein |
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| Protein accession | YP_003390855 |
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| Protein GI | 284040925 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.709243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC GTAGCAGATC GGCTTTATTT ACTCTTCGTA GAAGTAAGCT CGCGACAGCT
GGTTTAGCTG CGGTTGTCCT TTTATCAACC TGCAGCCAGA AAACAGCTGC GCAGCAATCA
CTTCGGGGGC TTTTGACGCA AACTGAACAT ATTTCGGGCA AGAAGGCCTA TCTGGCATCG
CCCTTTGTAA CGGCTGGCAA CCGGTTATAT ATGGTTGGAC ATCAGGATGG GGGATTCCCC
GATCTAGGCT GGCACATTAC GGGCGAGATG GGCGGAATAT GGGACCATCC AATCAAATTA
ATGGATGGGT TCACGGCTGC CGTGTCCATC AATCAAAAAC AGATATGCCT CGACAAAGCC
GATACGTTCA TTAATTATCC GTTTGCTAAT AAGCACCTGT ATCAACAGGT TGCCAACGGG
CTGGACATCG AGCGACTCCA ATTTGTACCC GACAACAAAG AGGGTATGGT GGTGGAATAC
ACCTTCATAA ATAAGCAAGC CAAACCGCTC ACGCTTCAAT TCACCTGGAC AGGCCATACC
GATCTGCGCC CGACCTGGCT GGGCGAACGA ACCAATATGG TCGATGCGCC GGATGCGGCA
ACCTGGACTG CAAAAAGCCA GTCCTGGCTG GCTAAGGATC AAAAGAATGA CTGGTTCGTT
ATGTTTGGTG CCAATGTGCC CGCCAGTCAG CATCATCAAA ACAAACCCTG CGAATTTGTA
TCGGCAGGGC GGGGATGTGG GGCTTCGCTG GTGTACACGA TCACGGTGCC CGCCAACGGA
AAAACACAAC TACCGATTAC GATTGCCGGT TCATACAAAT CGGCTGAGAT GGCTACCCGC
ACGTTTTCCG ATGTTCAGAA AAATACCTAC GTTTATCTGG CCAGCAAGAA AAGTCGGTAT
GCAACTATTG ACCAGCTTGC ATCGGTACAG GTGCCGGATA AAAAACTGGA ACAGGCGTTT
CGCTGGGTAA AATACAATAC CGACTGGCTG ATTCGCGAAG TGCCCGAAAT CGGCCGGGGA
CTGTCGGCGG GGTTACCGGA TTATCCGTGG TGGTTTGGGG CCGACGGCTG TTATACGCTT
ACGGGGCTTA TCACAACGGG ACATAAACAG CTCGTTTACG ACTCTGTCGA CCTGCTGAAT
AAAATATCCG AAAAGGAAAA CGGCAACGGA CGAATCATTC ACGAAGTATC GACGAACGGC
GCGGTGTATA ATCCCGGCAA TTTGAACGAA GTGCCCCAGT TTGCCAGTAT GATTGCGGAA
GTCTATCGAT GGACGGGCGA TAAAGGTTTT CTGCGCAAGT ACTTCCCGAC GGTTAAAAAA
GGGATGACCT GGTTGTTGGC GGAAAATGAT AAAGACAAAA ATCTGCTTCC CGACGGCTTC
GGCATGATGG AAATACACGG CATGAACAGC GAGATGATCG ATGTGGCGGT GTATACGCAG
GAGGCTTTTG CCAATGCGGC CTACATGGCA TCCGAACTTG GCGATAAAAC ACTGGCGATG
GATTACCAGC GTAAAGCAGA CAACCTGAAA ACGAAAATAA ACACCGATTT CTGGGTCCCT
GAAAGCGGCT CGTATGCCGA CTTTATCGGA ACAAAAGCGG AAGCGCTGGC CCTCGTTGAC
GGGGCCATTG TTCGCGCCGA TACGCTGCAC AAACCCTGGG CGGTTGAGGA ATTGAAAGCA
ACCCGGCAAA AGCTGCGCCT GTTGCCCGAG AATACTAAAA AAGGCTTTGT GCTGCACCAT
AACTGGGTAG TCAACACGCC GATGGAAACA GGAGTTGCCG ATCCCGATAA AGCAGCTATT
GCGCTCAGGA CGGCTAGTAA ATTTACGAAC CCCTTTGGTG TCTTCGTAAC GGGTATCGAC
CGCGACGAAT CGGCCGGTAC CGACGAGGGG TCGTTCAACT TAAACAAAAA AGTGTTTACG
TATACCGGGG CGGTGATGAC TCTGCCAACC GGTGTGGCAA CCATTGGTGA AAACAACTAC
GGCCATCCCG ACGAAGCGTT GGGGTATCTG AAACGAATGA CCAAAACGTT TAGCTACGCC
TTTCCGGGCT CTATTTACGA AGTGTCGCCG GACTACGGCA TGGTTACGCA GGCCTGGAAC
ATGTACAGTT ACGCCGTTCC GATCATCAAA CAGTTTTTCG GTATTCGCCC GGAAGCATCC
CGGCAACTTG TTACGATACG CCCGCAAATG CCCAGCGATT GGGACAATGC CCGTGTTGAG
AAAGTGACCG TAGGGGATAA CCTGTTGTCG ATGGCTTATG CAAAAGCAGG ACAGCAGCTG
ACATTGTCGA TTACCCAGAA ACAACCGAAC TGGACCGTAA GGCTGGCTTT CCCCAAAGGT
AAGTACCGTA ACTGGCAGGT AAATGGCAAA AATGTACCCG TTCAGAGTGA TACAAATACT
GATTTTGTGG AGCTTAAAGG CAGTTCACTA AGCGTACAGT TACAATAA
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| Protein sequence | MKTRSRSALF TLRRSKLATA GLAAVVLLST CSQKTAAQQS LRGLLTQTEH ISGKKAYLAS
PFVTAGNRLY MVGHQDGGFP DLGWHITGEM GGIWDHPIKL MDGFTAAVSI NQKQICLDKA
DTFINYPFAN KHLYQQVANG LDIERLQFVP DNKEGMVVEY TFINKQAKPL TLQFTWTGHT
DLRPTWLGER TNMVDAPDAA TWTAKSQSWL AKDQKNDWFV MFGANVPASQ HHQNKPCEFV
SAGRGCGASL VYTITVPANG KTQLPITIAG SYKSAEMATR TFSDVQKNTY VYLASKKSRY
ATIDQLASVQ VPDKKLEQAF RWVKYNTDWL IREVPEIGRG LSAGLPDYPW WFGADGCYTL
TGLITTGHKQ LVYDSVDLLN KISEKENGNG RIIHEVSTNG AVYNPGNLNE VPQFASMIAE
VYRWTGDKGF LRKYFPTVKK GMTWLLAEND KDKNLLPDGF GMMEIHGMNS EMIDVAVYTQ
EAFANAAYMA SELGDKTLAM DYQRKADNLK TKINTDFWVP ESGSYADFIG TKAEALALVD
GAIVRADTLH KPWAVEELKA TRQKLRLLPE NTKKGFVLHH NWVVNTPMET GVADPDKAAI
ALRTASKFTN PFGVFVTGID RDESAGTDEG SFNLNKKVFT YTGAVMTLPT GVATIGENNY
GHPDEALGYL KRMTKTFSYA FPGSIYEVSP DYGMVTQAWN MYSYAVPIIK QFFGIRPEAS
RQLVTIRPQM PSDWDNARVE KVTVGDNLLS MAYAKAGQQL TLSITQKQPN WTVRLAFPKG
KYRNWQVNGK NVPVQSDTNT DFVELKGSSL SVQLQ
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