Gene Slin_6092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6092 
Symbol 
ID8729873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7387964 
End bp7388728 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390853 
Protein GI284040923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTA AACGTTTACT CCTTTGTCTC TTGAGTTTAA CCATCTGGAA TTGTGCCCAG 
GCTCAGGACC CCGGCGTGGG GGGCAATGCG GTCAGCCCTG GCTCTCTGGT AACCAACGCG
CAAATCAACA TCAATGCGTC ATCTAACCCA ACTCTGGGCA CCAACAACGG GACTAATGTC
AATGCCAGCA CGAGCATCAC CGTATCGGGT CCGGGTCCTT TGCCGGTGAG GCTTGTATCG
TTTACGGCGC AGGCTCAACC CAATCAAACG GTAAGTTTAG GCTGGACCAC CGCTTGGGAA
AGTAATAACC AGGGCTATCG TATCGACCGT AGCAAAGACC TCAATAGCTT CGAGCTGGTT
GGAGAAGTAA ACGAGGTTGC CACCTCCAGC CAGACTCAGA CAACCTACCA GCTCACCGAT
CCAACCCCGT TTATGGGCAC TTCGTATTAT CGGCTGACCC AGGCCGATTT ATCAGGAAAA
GTGACGGTTT ATCCGGCTGT CTCAGTCTTG GTTCGGGAGG AAGCCTATGG CGTGTATCCT
AATCCGGTGA TCGGCGAGGA GGGCTTTGTG CTTCGGCTGG ATGAACCCCT TACGGCAGAA
TTGAGCTTCG TTAACCTACG GGGTGAGAAC ATCGCTCTCC AGCGAAGTAA GGCCGAAGAT
GGCAGGCTCC TGTTGCGCCC TGGTGTTACC TTACCGCCCA GTGTTTATTT GTTGACGGTG
AAGGAACGGG GACAAATCCG CCAGCATCGA GTTGTTATTA AGTAG
 
Protein sequence
MFTKRLLLCL LSLTIWNCAQ AQDPGVGGNA VSPGSLVTNA QININASSNP TLGTNNGTNV 
NASTSITVSG PGPLPVRLVS FTAQAQPNQT VSLGWTTAWE SNNQGYRIDR SKDLNSFELV
GEVNEVATSS QTQTTYQLTD PTPFMGTSYY RLTQADLSGK VTVYPAVSVL VREEAYGVYP
NPVIGEEGFV LRLDEPLTAE LSFVNLRGEN IALQRSKAED GRLLLRPGVT LPPSVYLLTV
KERGQIRQHR VVIK