Gene Slin_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6088 
Symbol 
ID8729869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7383460 
End bp7383948 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF785 
Protein accessionYP_003390849 
Protein GI284040919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC GAACGCCAAA GCTAAAGCAA ATCATTGGCA TGACCGACCT GGTCGATTTC 
CCGGATTTGG GGCTATTCGA CATCCAGGCC AAAGTCGACA CCGGTGCGTT TACGTCGGCC
CTGCACTGTA AGGATATACG CGTCATTAAG TCCGGGGGTA AACGCAAACT CAGCTTCTGG
CTTATTGATA AGACCGGGCT ACCCGCACGT AAATTTCGCA GCGACCAGTT TAGCCAGCGC
ATGATTCGTA ACTCGTTCGG CGTGGCCGAG TTGCGCTATG TCATCCAAAC CCGTATTGTT
CTTTTTGGCC GTACCATCCG GGCCGAGTTT ACCCTGGCCG ACCGCGAACA ACTCAAAAAC
CCCGTACTGC TGGGCCGCAA GCTTCTTCGG AACCGCTTTA TCGTGGATGT ATCCCAGAAA
AATCTGTCGT ACGAAGCAAA AACCGCAGCC CAGACCAGCG TTTTATCAAC CGACCCGGAC
GACGACTAA
 
Protein sequence
MNARTPKLKQ IIGMTDLVDF PDLGLFDIQA KVDTGAFTSA LHCKDIRVIK SGGKRKLSFW 
LIDKTGLPAR KFRSDQFSQR MIRNSFGVAE LRYVIQTRIV LFGRTIRAEF TLADREQLKN
PVLLGRKLLR NRFIVDVSQK NLSYEAKTAA QTSVLSTDPD DD