Gene Slin_6056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6056 
Symbol 
ID8729837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7350958 
End bp7352154 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content52% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003390817 
Protein GI284040887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC TTACGTATTC GCGTCGCCAT TTTATGCACC AGATGGGGGC TGCATCGGTC 
GTACTTCCCG GGCTGTCTGT GCTTAGCCTG CAAAGCTGCG GGGGCAAAAG TGATAAAGCA
ACGGCCGAGT CGGCCAGTTC GACTACAACT ACAGAAGGCT CGAAGCGTAA GCTGGGGATT
GCACTGGTGG GCTTGGGTCA GTACAGTGAA GGGCAACTGG CACCTGCTCT CGAAAAGACC
ACCAACTGCC GACTAGCGGG CATCGTAACG GGCACACCAG ATAAAGCCGA GAAGTGGAAG
TCAAAGTACA GCATCCCCGA AAAGAACATC TACGATTACA AGACGTTCGA TAAAATCGCC
GACAACCCGG ATATCGACAT TGTGTATGTG GTGCTCCCTA ACTCCATGCA CGCCGAGTAT
GTCATTCGGG CGGCTAAAGC CGGTAAGCAC GTCATCTGCG AAAAGCCGAT GGCGATGAAT
GCCGAAGAAT GTCAGCAGAT GATTGATGCC TGTAAAAAAG CCAATCGGCA ATTATCAATC
GGTTATCGGC TGCACTTCGA ACCGCATAAT CAGGAGATGA TGCGGCTGGG ACAGAAAGAG
ACCTTTGGGA AAATAAATCG GATCGTAGCC GAAAATGGGC AGGTTCAGGA CGAAAGTTCG
CCCTGGCGTC TGGGCCGGGG TGTAGGCGGG GGTGGCCCCG TGCGCGATGT GGGTGTGTAC
TGCATTCAGG GGGCTATTTA TACCAAAGGG CAGATTCCTA TTGCGGTTAC AGCCCGGAAA
CACCCGGTTA CGGATACAGA GAAATTCAGC AAGATCGAAG AAGGCATGGA TTTCAGCCTG
TATTTTCCCG ATGGAACGAT AGCCGCCTGC AAAGCCAGCT TTAACGATAA GTATAACAAG
CTGCGGGCCG AAGCTGCCAA AGGCTGGTTT GAACTAGCTC CAGCCTACGC GTATGATGGT
CTGGAAGGAA GAACCAGCCA GGGGAAAATG GAGATTGAGA ACGTGCCGCA ACAGGCGCAT
CAAATGGATG CCTTCGCGAA CTGCATCCTG CAAAACAAAC CCACAACCGT ACCCGGCGAA
CTGGGTAAGC GGGATGTGCA ACTGATCGAA GCCATTTTCG AAGCCGCCCG AACTGGCCAG
AAAGTATCGA CCAAAGATGT CGTTCAGGTA CTCGATAAGT CCGCTCTTAT GAGTTAA
 
Protein sequence
MKQLTYSRRH FMHQMGAASV VLPGLSVLSL QSCGGKSDKA TAESASSTTT TEGSKRKLGI 
ALVGLGQYSE GQLAPALEKT TNCRLAGIVT GTPDKAEKWK SKYSIPEKNI YDYKTFDKIA
DNPDIDIVYV VLPNSMHAEY VIRAAKAGKH VICEKPMAMN AEECQQMIDA CKKANRQLSI
GYRLHFEPHN QEMMRLGQKE TFGKINRIVA ENGQVQDESS PWRLGRGVGG GGPVRDVGVY
CIQGAIYTKG QIPIAVTARK HPVTDTEKFS KIEEGMDFSL YFPDGTIAAC KASFNDKYNK
LRAEAAKGWF ELAPAYAYDG LEGRTSQGKM EIENVPQQAH QMDAFANCIL QNKPTTVPGE
LGKRDVQLIE AIFEAARTGQ KVSTKDVVQV LDKSALMS