Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6056 |
Symbol | |
ID | 8729837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7350958 |
End bp | 7352154 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003390817 |
Protein GI | 284040887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC TTACGTATTC GCGTCGCCAT TTTATGCACC AGATGGGGGC TGCATCGGTC GTACTTCCCG GGCTGTCTGT GCTTAGCCTG CAAAGCTGCG GGGGCAAAAG TGATAAAGCA ACGGCCGAGT CGGCCAGTTC GACTACAACT ACAGAAGGCT CGAAGCGTAA GCTGGGGATT GCACTGGTGG GCTTGGGTCA GTACAGTGAA GGGCAACTGG CACCTGCTCT CGAAAAGACC ACCAACTGCC GACTAGCGGG CATCGTAACG GGCACACCAG ATAAAGCCGA GAAGTGGAAG TCAAAGTACA GCATCCCCGA AAAGAACATC TACGATTACA AGACGTTCGA TAAAATCGCC GACAACCCGG ATATCGACAT TGTGTATGTG GTGCTCCCTA ACTCCATGCA CGCCGAGTAT GTCATTCGGG CGGCTAAAGC CGGTAAGCAC GTCATCTGCG AAAAGCCGAT GGCGATGAAT GCCGAAGAAT GTCAGCAGAT GATTGATGCC TGTAAAAAAG CCAATCGGCA ATTATCAATC GGTTATCGGC TGCACTTCGA ACCGCATAAT CAGGAGATGA TGCGGCTGGG ACAGAAAGAG ACCTTTGGGA AAATAAATCG GATCGTAGCC GAAAATGGGC AGGTTCAGGA CGAAAGTTCG CCCTGGCGTC TGGGCCGGGG TGTAGGCGGG GGTGGCCCCG TGCGCGATGT GGGTGTGTAC TGCATTCAGG GGGCTATTTA TACCAAAGGG CAGATTCCTA TTGCGGTTAC AGCCCGGAAA CACCCGGTTA CGGATACAGA GAAATTCAGC AAGATCGAAG AAGGCATGGA TTTCAGCCTG TATTTTCCCG ATGGAACGAT AGCCGCCTGC AAAGCCAGCT TTAACGATAA GTATAACAAG CTGCGGGCCG AAGCTGCCAA AGGCTGGTTT GAACTAGCTC CAGCCTACGC GTATGATGGT CTGGAAGGAA GAACCAGCCA GGGGAAAATG GAGATTGAGA ACGTGCCGCA ACAGGCGCAT CAAATGGATG CCTTCGCGAA CTGCATCCTG CAAAACAAAC CCACAACCGT ACCCGGCGAA CTGGGTAAGC GGGATGTGCA ACTGATCGAA GCCATTTTCG AAGCCGCCCG AACTGGCCAG AAAGTATCGA CCAAAGATGT CGTTCAGGTA CTCGATAAGT CCGCTCTTAT GAGTTAA
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Protein sequence | MKQLTYSRRH FMHQMGAASV VLPGLSVLSL QSCGGKSDKA TAESASSTTT TEGSKRKLGI ALVGLGQYSE GQLAPALEKT TNCRLAGIVT GTPDKAEKWK SKYSIPEKNI YDYKTFDKIA DNPDIDIVYV VLPNSMHAEY VIRAAKAGKH VICEKPMAMN AEECQQMIDA CKKANRQLSI GYRLHFEPHN QEMMRLGQKE TFGKINRIVA ENGQVQDESS PWRLGRGVGG GGPVRDVGVY CIQGAIYTKG QIPIAVTARK HPVTDTEKFS KIEEGMDFSL YFPDGTIAAC KASFNDKYNK LRAEAAKGWF ELAPAYAYDG LEGRTSQGKM EIENVPQQAH QMDAFANCIL QNKPTTVPGE LGKRDVQLIE AIFEAARTGQ KVSTKDVVQV LDKSALMS
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