Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6032 |
Symbol | |
ID | 8729813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7315352 |
End bp | 7315951 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003390793 |
Protein GI | 284040863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.40169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAG CCCAGGTAAA CGACAGTGAG TTGATTTCCC TGTACATCCG TGGTAATGAA AAAGCCTTTG CTAAATTAGT GCAACGGCAC AAATCGAAAA TTTACACCAC TATATACCTG ATTGTTAAAG ATCAGTACAT TGCGGAAGAC CTAATGCAAG ACACGTTCAT CAAGGCCGTG GACACCATTA AGTCGGGTAA ATATAACGAG GAGGGAAAAT TTCTACCCTG GATCATTCGA ATTGCTCACA ACTTGGCCAT TGACTATTTC CGAAAAGATA AACGCTACCC CAGTGTGGTG TTTGAAGACG GAAGCAGTGT TTTCAATACG CTTGAGTTTG CGGAGGATTC GGTTGAATCA CTTCAAATCC GGCAGGAAAC ACATGAGCAT TTGCGCGAGT TGATACAGCG ATTGCCAGAA CAACAGCGTC AGGTGCTTAT AATGCGGCAC TACGAGGAAA TGAGTTTCCA GGAGATTGCC GATGCTACCG GCGTCAGCAT CAACACGGCA TTGGGACGAA TGCGTTATGC GTTAATCAAT TTGCGCAAAC AACTGAGCAA ACGTTCGCCG AGTTATGATA AAAACATTTA CCCAAGATGA
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Protein sequence | MEKAQVNDSE LISLYIRGNE KAFAKLVQRH KSKIYTTIYL IVKDQYIAED LMQDTFIKAV DTIKSGKYNE EGKFLPWIIR IAHNLAIDYF RKDKRYPSVV FEDGSSVFNT LEFAEDSVES LQIRQETHEH LRELIQRLPE QQRQVLIMRH YEEMSFQEIA DATGVSINTA LGRMRYALIN LRKQLSKRSP SYDKNIYPR
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