Gene Slin_6032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6032 
Symbol 
ID8729813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7315352 
End bp7315951 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content44% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003390793 
Protein GI284040863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.40169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG CCCAGGTAAA CGACAGTGAG TTGATTTCCC TGTACATCCG TGGTAATGAA 
AAAGCCTTTG CTAAATTAGT GCAACGGCAC AAATCGAAAA TTTACACCAC TATATACCTG
ATTGTTAAAG ATCAGTACAT TGCGGAAGAC CTAATGCAAG ACACGTTCAT CAAGGCCGTG
GACACCATTA AGTCGGGTAA ATATAACGAG GAGGGAAAAT TTCTACCCTG GATCATTCGA
ATTGCTCACA ACTTGGCCAT TGACTATTTC CGAAAAGATA AACGCTACCC CAGTGTGGTG
TTTGAAGACG GAAGCAGTGT TTTCAATACG CTTGAGTTTG CGGAGGATTC GGTTGAATCA
CTTCAAATCC GGCAGGAAAC ACATGAGCAT TTGCGCGAGT TGATACAGCG ATTGCCAGAA
CAACAGCGTC AGGTGCTTAT AATGCGGCAC TACGAGGAAA TGAGTTTCCA GGAGATTGCC
GATGCTACCG GCGTCAGCAT CAACACGGCA TTGGGACGAA TGCGTTATGC GTTAATCAAT
TTGCGCAAAC AACTGAGCAA ACGTTCGCCG AGTTATGATA AAAACATTTA CCCAAGATGA
 
Protein sequence
MEKAQVNDSE LISLYIRGNE KAFAKLVQRH KSKIYTTIYL IVKDQYIAED LMQDTFIKAV 
DTIKSGKYNE EGKFLPWIIR IAHNLAIDYF RKDKRYPSVV FEDGSSVFNT LEFAEDSVES
LQIRQETHEH LRELIQRLPE QQRQVLIMRH YEEMSFQEIA DATGVSINTA LGRMRYALIN
LRKQLSKRSP SYDKNIYPR