| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6030 |
|---|
| Symbol | |
|---|
| ID | 8729811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7314350 |
|---|
| End bp | 7314997 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_003390791 |
|---|
| Protein GI | 284040861 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.22516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA AGGAACGATT CAGACGGTTC ATTGAGTATT TCACGGAACA CTATCCCGAC
CCTAAAACGG AACTCCACTT CAGCAACCCA TACGAGTTAT TAGTGGCGGT GATTCTGTCG
GCCCAGTGTA CCGATAAACG AATTAATCAG ATTTCACCAG CCCTCTTTGC CCGGTTTCCG
GAAGCAGAGT CGCTGGCTGC GGCCTCGGTA GAGGAAGTGT TCTCCTACAT ACGGAGTGTT
TCGTATCCGA ACAATAAGGC AAAACACCTG GTTGGCATGG CTAACGCCTT GATGAATCGG
TTTGGGGGCG AAATTCCGGC AACGGTCGAT GAGTTGCAAA CCTTACCAGG CGTAGGACGT
AAGACGGCCC ACGTAATTTT GTCCATAGTC TATAATGAAC CGACAATGGC CGTCGATACG
CACGTTTTTC GCGTATCGCA TCGGCTTGGG CTGGCTCCGT TAACGGCCAA TACACCCCTG
GCCGTGGAGA AAGCTCTAAT GGCACACATT CCCAAACAAC ACGTTCCTAA AGCACACCAC
TGGCTTATCT TACACGGCCG CTACGTGTGC CTGGCGCGTT CGCCCAAGTG TGAAGAATGC
GCGTTGAAGG AGTTTTGTAA GTATTTTGAA AAAGTAGTGA GGAGTTAG
|
|---|
| Protein sequence | MQKKERFRRF IEYFTEHYPD PKTELHFSNP YELLVAVILS AQCTDKRINQ ISPALFARFP
EAESLAAASV EEVFSYIRSV SYPNNKAKHL VGMANALMNR FGGEIPATVD ELQTLPGVGR
KTAHVILSIV YNEPTMAVDT HVFRVSHRLG LAPLTANTPL AVEKALMAHI PKQHVPKAHH
WLILHGRYVC LARSPKCEEC ALKEFCKYFE KVVRS
|
|---|
| |