Gene Slin_6027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6027 
Symbol 
ID8729808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7311610 
End bp7312524 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003390788 
Protein GI284040858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0713688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTA AAAATTTCGG GAAAGCCGCC CTACTCGTCG CTGTTGTAGC GGCCTGCGGT 
AAAAACCGCC AACAGGTGAC GGAAAACGGC CTGAAGTACA CCATCCATGA GCAAACCGAA
GGGAACCGCA AAGGTAAAGT TGGCGACATT CTGACGCTGC ACCTGACCCT GATGAACAAC
AAAGATTCTG TGCTGCGCGA TACGCACAAA GAAGGCACTC CGTTCCAGAT GTTGTTGCAG
GTACCCCCTT TCAAAGGATC GTATGAAGAA GGGCTGACTA TGCTGGGAAA AGGCGATAGC
GCAACGTTTT ACGTAAGTGC CGATTCGCTG TTTACCAAAG CCATGCAGCC CCTGCCCCCG
GGTGTGCAGA AAGGAACCGA CATTGGTATT GCGGTAAAAA TCCTGAACGT ACAGACCGAA
GATGAGTATA AGAAAGCACA GGCCGCTGAT TTTGAAAAGC AGAAAGGTGT TGACGCGAAA
ATTATTGAAA ACTACATCGC GAAAAACGGC CTGACAGGTA AAGCTCAAAA AACAGAATCG
GGCGTCTATT ACGTAGTTAC CAAGCCGGGC ACTGGCCCGA CACCTAATAA AGGTGATGTC
GTGCAGGTTC ATTATACCGG TAAACTGCTG GACGGCAAAG TATTCGATAG CTCACGCACA
AACCCACAGG CGGGTGGAAA GCCAGCTCAG TTCCAGATTG GTGTTGGCAT GGTTATTCCC
GGTTGGGAAG AGGGCGTGAG CAAGCTCCAC AAAGGTGAAT CGGCTACGTT GATTATTCCT
TCAACGCTGG CTTACGGCCC CCGTGGTAAC CAGGGTATCG CGCCAAACTC CGTTCTGCTG
TTCGATATTG AACTGATCGA TATCCAGAAA GGCCAGCCTG GCCAGCCCGG CGGTATGCCG
CAGCCCGGCC GGTAA
 
Protein sequence
MSLKNFGKAA LLVAVVAACG KNRQQVTENG LKYTIHEQTE GNRKGKVGDI LTLHLTLMNN 
KDSVLRDTHK EGTPFQMLLQ VPPFKGSYEE GLTMLGKGDS ATFYVSADSL FTKAMQPLPP
GVQKGTDIGI AVKILNVQTE DEYKKAQAAD FEKQKGVDAK IIENYIAKNG LTGKAQKTES
GVYYVVTKPG TGPTPNKGDV VQVHYTGKLL DGKVFDSSRT NPQAGGKPAQ FQIGVGMVIP
GWEEGVSKLH KGESATLIIP STLAYGPRGN QGIAPNSVLL FDIELIDIQK GQPGQPGGMP
QPGR