Gene Slin_6022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6022 
Symbol 
ID8729803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7302947 
End bp7303534 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003390783 
Protein GI284040853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.318812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.45154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA CCCCATCGCA CATTATCGAG TATTTATTCT GTCCGCGTTT TACGTATTTC 
GAGTACGTAC TGGCGATTCC GCAGTATGAA GAGAAGAATT ACAAGGTTAT GCGGGGGCGG
AACCTGCACG ACGAGCGATT AGAGCGCAAC AAGGACTACC TCCGCAAGCG GCTGGGGCGA
CCCGGTGCGC CGGTCACAGA AAAACACGCC GACCAGTATC TGACGAATGA GTTGATTCGT
GGGGTGGTGG ATGAGGTGTT GGGTTTCGGT GATGGAACGA TGGCTCCGCT GGATTATAAG
TTTGCCGAGT TTAAAGACAA GGTATATGAT ACCTACCGAA CACAGTTGTA CTGTTATGCC
TGGCTCATTG AAGCGAACTT CGGTCGGCCG GTTGACCGTG GTTTTCTCGT CTACACTCGT
AGCAACAATC GTGTGATAGA GGTACCGATT GCCGAAACCG ATAAAGTGGC GGTAAAGCGA
GCGGCTGAGG CTATTTTCAC GATTATTGAG CGTAATTTTT ATCCGAAGGC TACTAAAGCG
AAGGCACGTT GTGTAACTTG CACGTACCGC AATATTTGCA TCAAATAA
 
Protein sequence
MTLTPSHIIE YLFCPRFTYF EYVLAIPQYE EKNYKVMRGR NLHDERLERN KDYLRKRLGR 
PGAPVTEKHA DQYLTNELIR GVVDEVLGFG DGTMAPLDYK FAEFKDKVYD TYRTQLYCYA
WLIEANFGRP VDRGFLVYTR SNNRVIEVPI AETDKVAVKR AAEAIFTIIE RNFYPKATKA
KARCVTCTYR NICIK