| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6017 |
|---|
| Symbol | |
|---|
| ID | 8729798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7297786 |
|---|
| End bp | 7298499 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | CRISPR-associated protein Cas5 |
|---|
| Protein accession | YP_003390778 |
|---|
| Protein GI | 284040848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.114145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.888817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTGCT GTACCATTGA ATTGAAATCT GTTACAGCCT CGTTTCGGAA CCCGGAGTTT
CAAAATTTTC ACAAGTCATT TCCGTTACCC CCGCCAACTG CCCTTATTGG ACTGGCGGGG
GCGGCTCTTG GGCTTTCGCC CCGGATGGCT CAGGATTTTT TAGACACAAA CCAGTTCCAG
GCGGGGGTAT CAGGTAAAGG CGAGGGAATG ACTCGCGACC TGTGGAAATA TGACCGACTG
ACAGGAACTG GCAGTAGCAT TATTTTACGC GAAATCTATG TAAATCCGCA CTACAGGCTT
GTCTTTGGGA GCGATAACCA TGAGGCTGTG GAGCAACTTA AGGCGGCTTT CGACAGTCCG
GTTTATGCAC TGACTCTGGG CCAAAGCGAT TCACTGGCAA AAATCGTGCG TACTACGCTG
ACCGATGCAG TAGTTGAAGG ACAAACACTT GAAAACACAT TGGTGGAAGG AGATATTGTT
CCGGCTATTC TAGAGCAAGT CCTTTATGGT GGTACGTTTT CGCTAAGCCT AAGTACATCT
GATCCAATTG CTTATCAACT TCCAACTCGC TTTAACTACA AGGCAGATTA CGGTATGAGA
ACTGTCTCGG AGCGAAAACT ATTTTCGTTT GTCGGTCCCC AAGTTACATT TCAAAATCGA
ACGTTCTCCG GTGTGCAGGT GGGTGATGTA TTTGTTCCGC TTTTTAAGAT TTGA
|
|---|
| Protein sequence | MLCCTIELKS VTASFRNPEF QNFHKSFPLP PPTALIGLAG AALGLSPRMA QDFLDTNQFQ
AGVSGKGEGM TRDLWKYDRL TGTGSSIILR EIYVNPHYRL VFGSDNHEAV EQLKAAFDSP
VYALTLGQSD SLAKIVRTTL TDAVVEGQTL ENTLVEGDIV PAILEQVLYG GTFSLSLSTS
DPIAYQLPTR FNYKADYGMR TVSERKLFSF VGPQVTFQNR TFSGVQVGDV FVPLFKI
|
|---|
| |