| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6007 |
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| Symbol | |
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| ID | 8729788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7283481 |
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| End bp | 7286528 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_003390768 |
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| Protein GI | 284040838 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00134837 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG TTTTACAGGT GCTTTTAGCC GCTTCTTTGT GGCTAATGAC AGCTTCTGGC
TTTGCCCAGA CAACGCTGGC CCAATGGAAT TTTGAAGGGG CACCCGGCTC GGTGACCGCT
GCTGCCGCAT CGACAATCAC GGCCGATAAT GCCGCTTTTG GATCGGGGGT AACCAGCGTC
ACGTTTGTAG CCGGTAATGG GGGAGGCCGG GCCTATACCG GAACGGGCTG GAATGTAACA
AGCCCGGACG TCAACAAGTA TATCCAGATT AGCCTCGGGC CGGTGGCCAG TTATACCATG
GCCCTGTCGC AGCTGAGTTT CGACGAGCAG CGGTCCGGTA CAGGACCAAC AACGTGGGTG
TTACGGTCGA GTCTGGACAA TTTTACTGCC GATATCAACA CGACGCCCAC ATCGACCACC
TCGCCTACGT CAAATGGCTC ATTTACATCG CGGGTGGTGT CGTTGAGTGC CAATACTGCC
TTTCAGAATT TAAGTACCCC CATCACCTTT CGGATTTATG GTTACGGAGC CAGCGGGTCG
GGCGGAACCT GGCGATTCGA TAACATTCAG GTGAGCGGCA CCACCGGCCC CAGCGATCCG
ACAGCACCGC TTCTGTCGGT TATACCGGGT TCGCTGCCCG GCTTCGCTAC GGTGCCCGGT
ACGCCTTCAA CGGCAAAATC GTATACGGTG TCCGGGGTCA ATCTTACGAG TGATCTGACC
ATAACTGCCC CAACGGGCTA TGAAGTCAGC AAAGACAACG GTACCAGTTA TGCTACTGTG
CAGACGTTGA CGCAGTCGGG CGGAATCATT GCGCCTACAG CCATCAGTGT CCGGCTTACG
GGGGCGGGCA ATGGTACTGT AAACGGCACA ATCACGAATG TGGCCGGTGC TGTTTCTAAA
AATGTGACGG TGAGTGGAAG CGTCGATGTG TCGAATGGAC CAGTGCCTAT CGCTACAGCC
CGGGGGCAGG TCGGTACAAC GGTTATCATT CAGGGGCGCG TAACGGTGAG CAGCCAGTTT
GGCGGCAAGC TGTTTTACAT ACAGGATGCT ACCGGCAGCA TTGCCGTTTA CGACCCTACC
ACAAGCTACG GAAATCAGGT ACAACTCGGC GATCTGGTGC AGGTGAGCGG ACCGGTGGCG
CTTTTTCAGG GGAAAAAAGA AATCAACGGG GTTGCGACCT TTCTGAAGGT CAATGATACA
AATCAGCCCG TTACCCCTCA GGTTATTACG GCTACGCAGC TCACCTCGGG TGCCTTCGAA
GGGCAGTTGG TAACGGTTCA GAATGCAACC ATTGGCGGCT CGGGGGCAAC GTTTCAGGGC
GGAGCCGCCG GGACGTATCC GCTCACGACC AGCGATGGGA CCGCCGAGTT GTTCGTAACG
AGTGCCTCCG ATCTGGTGGG GGCTACCAAA CCTACGGGTG CACTGACCGT TACGGGCATT
GCCGATCGTT ACATACCGAC CGATGCGTCG AAGAATGTCG TTCAGCTTAA CCCACGCGCC
ATCTTCGATA TTCCCGGTTC GGAAGTGCCC CCGCCACCAC CAACCATAAC GACCTGCCCG
GCCAATCGGA CCATCACCGA TAATGACCAG ACATTGAGTG TAGTAAGCTG GAACCTCGAA
TGGTACGGTT TTGATGGCGG TTCGTACACT TGTACCAATG GCTCCAGAAC GTACGCCGAT
AATGGCCCGA CAAATGAGAC GCTTCAGGCC CAGAATGTTC GCTCTGTAAT GGACGCGTTC
AACGCTGACA TTTATATTTT GCAGGAAGTG AGCGATAAGA ACCTGCTTGT GACCAATACC
CCGGCCGGCT ACGCGCTGAG CTGTTCCGAT CAATACACGT CGTACTTCTT TCAGGACTTG
TGCGATGCCA ACGGCAATCC GCAGGGGTTC AACCCAACGA GCCTCAACCA GAAAGTCTGC
GTAATGTACA AAACGAGCGT TGTTTCGATG ATTCCCGCCG AAAGCAAACC GTTGCTCACT
GACAAGTACA GCTATACCAC AACACCACGC AGCGATGCCT GGGCGTCGGG TCGGTTACCA
TACCTGTTTG TGGCGAACGT AACCGTCGAT GGGCAAACCC GGAAACTATA CATCGTTGAT
ATTCATGCCA AATCCGGATC AGCACAAGCC GATTACAACC GCCGGAAACA GGACATCATT
GACCTGAAAG CTGAACTGGA TGCCAATTAT GGTAATGTAA ACCTCATCAT GGCTGGTGAC
TACAACGACG ATGTCGATCA GTCCATTGCC GCCGGTAATC CTTCGTCGTA CGCCAACTTC
GTGAGCGACC CCAACTATAC CGTTATTTCC AGTGAGTTGA GCAGCAGCAA CTGTAACACC
GATGCGAACT TTACCGACGC CATCGACCAC ATTACGGTAT CCAACGAGCT GGCGTCGTCT
TACGTAGCCG GTTCGGTGGC ATCGGTTCGG CCAGCCGTTG TCAATTACGC CCTGACAACC
TCCGACCACT ATCCAACCTT CGCCCGTTTC ACACTAGCCA GTCCTTTACC GGTGCGCCTG
ACTTCCTTTG CTGCAAAGCC AGTTGGCGAG ACGGTGGGTA TATCCTGGAC GACGGCCAAC
GAAACGAACA GTGCTTATTT CGAGGTAGAG CGTAGTGTCG ATGCACGTGA GTTCGCGTCT
ATTGGCCGGG TAGCGGCTGC GGGAGATGCC CAATCAATAA AAACCTATGG CCTTGTCGAT
CAACACCCCC TGAGCGGTAC CAATTACTAC CGGTTGAAAC AGGTTGACCT GGATGGCAAG
ACGGCTTACT CGACAATTGT ATCTGTCGTG ATGGATAATC TAACGCCCGC TATGGAACTG
CTGGGGAATC CGGTCGACAA TCAGGCGATT CGGGTGGCTG TTCGTAACCT GCCGAACGCT
GTCTATCGTT TAACGACCCT TACCGGACGT GAGCTTCCTG TGCAGGGCCA AACTCAGGCG
GATGGGTCGA TGCTGCTGAC AACCGCACAG GCTCTCAGCC CCGGTGTGTA CCTGCTCCGG
GCTGATTCGG GAACTACCCG CATTATGCGG AAAGTGGTAA TACGGTAA
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| Protein sequence | MKHVLQVLLA ASLWLMTASG FAQTTLAQWN FEGAPGSVTA AAASTITADN AAFGSGVTSV
TFVAGNGGGR AYTGTGWNVT SPDVNKYIQI SLGPVASYTM ALSQLSFDEQ RSGTGPTTWV
LRSSLDNFTA DINTTPTSTT SPTSNGSFTS RVVSLSANTA FQNLSTPITF RIYGYGASGS
GGTWRFDNIQ VSGTTGPSDP TAPLLSVIPG SLPGFATVPG TPSTAKSYTV SGVNLTSDLT
ITAPTGYEVS KDNGTSYATV QTLTQSGGII APTAISVRLT GAGNGTVNGT ITNVAGAVSK
NVTVSGSVDV SNGPVPIATA RGQVGTTVII QGRVTVSSQF GGKLFYIQDA TGSIAVYDPT
TSYGNQVQLG DLVQVSGPVA LFQGKKEING VATFLKVNDT NQPVTPQVIT ATQLTSGAFE
GQLVTVQNAT IGGSGATFQG GAAGTYPLTT SDGTAELFVT SASDLVGATK PTGALTVTGI
ADRYIPTDAS KNVVQLNPRA IFDIPGSEVP PPPPTITTCP ANRTITDNDQ TLSVVSWNLE
WYGFDGGSYT CTNGSRTYAD NGPTNETLQA QNVRSVMDAF NADIYILQEV SDKNLLVTNT
PAGYALSCSD QYTSYFFQDL CDANGNPQGF NPTSLNQKVC VMYKTSVVSM IPAESKPLLT
DKYSYTTTPR SDAWASGRLP YLFVANVTVD GQTRKLYIVD IHAKSGSAQA DYNRRKQDII
DLKAELDANY GNVNLIMAGD YNDDVDQSIA AGNPSSYANF VSDPNYTVIS SELSSSNCNT
DANFTDAIDH ITVSNELASS YVAGSVASVR PAVVNYALTT SDHYPTFARF TLASPLPVRL
TSFAAKPVGE TVGISWTTAN ETNSAYFEVE RSVDAREFAS IGRVAAAGDA QSIKTYGLVD
QHPLSGTNYY RLKQVDLDGK TAYSTIVSVV MDNLTPAMEL LGNPVDNQAI RVAVRNLPNA
VYRLTTLTGR ELPVQGQTQA DGSMLLTTAQ ALSPGVYLLR ADSGTTRIMR KVVIR
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