Gene Slin_6006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6006 
Symbol 
ID8729787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7282176 
End bp7283276 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390767 
Protein GI284040837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG CTTTCTTCGC TGGCCTGCTT TTGTGGTTGC TCGAAATTTT GTCTGTTCAG 
GCGCAAGTAA CACCGTTTAC GGCTAACTGG ACGTTTGAAG GAAACGATAA CGGTACGACA
TCGAGCGGGC TCGTCACTGC GTCAAGCGTT ACGTATACAG GCGTAAATCC GCTGGCGGTC
AATAAGTACA CAACGGGCTA TGTCAATCTG GGGGTTAACG TACAGAACTG GTCAACATCA
GTCTGCAATC AGACCGAATA CATTCAGTTT TCGGTTCAGC GCGTTGGTAC GGCTACGATT
ACGCTCACGT CGCTGTCCTT TGCCTTCGCC CGGTCAGCGC AGGGGCCAAC GCAGTTGACG
GTTCGATCAA GTGCTGATGG GTTTGGTAAT GATATCTATT CGCAGGGCGT CACAACAAAC
TACCAGGTGG CGTCGATCGC GTTGAACGGG GCTGGGTTTA CCAACCAGGC TGGCCCGGTA
ACGTTTCGGA TTTACGCCTG TAACCCAGCG GCCGGGGGCG GCACGATCCG ACTGGACGAG
ATTCAAATTA ATGCAAACGT GCTGCCGGTC ACCTTACTTT CATTCAAAGC AACCCCTCAG
AGTGACCGTG TTCAACTAGC CTGGGAAACG GCAAGTGAAC GTAACGCCAG TCATTTCAGA
GTTGAGCGCA GTCTGGATCT GGGTGAATAT GTTTCCGTTG GCGAGGTTGC TGCCGGGGGG
AATACCAACG AACAGCACTA TTATGGGGTA ACGGATATGA ACCCCCGCCC CGGCATCAAC
TACTACCGGC TAACCCAACT GGATGTTGAT GGTACGGCGC ATACGTATAA GCCCATCTCG
GCCATTGTCC GACTGGCTGA CCCGGTAGTA GCCGTGTCCC CAAATCCGGC CAGCCCCGAC
CGGATTCATA TCAGGCTGTG GAATGCCGAT ACGGCCGTGA TTCGCTTACT ATCGAGCGCG
GGTCAGGAGA TGGAAGGGTG GCTGGAGCGC CGACCGGGTG AAGCCGACCT GCTATTTGCG
CAACCGTTGC CGCAGGGGGT ATACTCGCTG GAAATCCAAC TGAACGATAG GAAGCAGTCT
ATCAAAGTGC TTGTGCTGTA G
 
Protein sequence
MKKAFFAGLL LWLLEILSVQ AQVTPFTANW TFEGNDNGTT SSGLVTASSV TYTGVNPLAV 
NKYTTGYVNL GVNVQNWSTS VCNQTEYIQF SVQRVGTATI TLTSLSFAFA RSAQGPTQLT
VRSSADGFGN DIYSQGVTTN YQVASIALNG AGFTNQAGPV TFRIYACNPA AGGGTIRLDE
IQINANVLPV TLLSFKATPQ SDRVQLAWET ASERNASHFR VERSLDLGEY VSVGEVAAGG
NTNEQHYYGV TDMNPRPGIN YYRLTQLDVD GTAHTYKPIS AIVRLADPVV AVSPNPASPD
RIHIRLWNAD TAVIRLLSSA GQEMEGWLER RPGEADLLFA QPLPQGVYSL EIQLNDRKQS
IKVLVL