Gene Slin_6005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6005 
Symbol 
ID8729786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7280940 
End bp7282109 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPhosphoribosylformylglycinamidine cyclo-ligase 
Protein accessionYP_003390766 
Protein GI284040836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC GTTATGCCCA ACGCGGAGTT TCCGCCAGTA AAGAAGACGT TCACAACGCC 
ATTGCCCAGC TCGATAAGGG GTTATTTCCC AAAGCTTTCT GCAAAATTGT ACCCGATACG
CTGGCGGGCG ACCCCGATTT CTGCACCATC ATGCACGCCG ACGGAGCCGG TACGAAGTCA
TCACTGGCTT ACCTGTACTG GCGCGAAACT GGCGATCTGA GCGTTTGGAA AGGCATTGCC
CAGGATGCAG TCGTGATGAA TACCGACGAT CTGATCTGCG CCGGAGCCAC CGGACCCATG
CTGCTCTCGT CGACCATCGG CCGTAATAAA AACCTGATTC CGGGCGAGGT CATTGCCGAA
ATCATCAACG GTACCGAAGA GGTTCTGCAA ATGCTCCGCG ATCACGGCAT CGAGATCTAC
AGCACCGGGG GCGAAACCGC CGACGTTGGC GATCTGGTGC GTACGGTCAT TGTCGATAGT
ACGGTCATTG CCCGGATGCG TCGCGACCAG GTAATCAGTA ACGACCGAAT TCAGGCTGGC
GATGTCATCG TTGGCCTAGC GTCGTTCGGT CAGGCAACCT ACGAAACAAC CTATAACGGC
GGTATGGGCA GCAACGGGCT CACCTCGGCC CGCCATGATG TACTGGCTCA TTACCTCGCC
GGGCAATACC CCGAGAGTTT TGACCCGGCC ATTGATAAAT CATTGATCTA TAGTGGTTCG
AAACGGTTGA CGGATAGCGT GTCGACCGGA ACCGCCAACA CGACGGTTGG TCAGCTTATC
CTGTCGCCAA CACGCACCTA TGCGCCCGTT GCCAAACGGC TTCTGGACGA ACTCCGGCCG
CAGATTCACG GGATGGTTCA CTGCTCGGGT GGGGCACAAA CGAAAGTGCT GCACTTTGTT
GATAACGTGC ATATCATTAA GGATAAACTG TTCCCAATTC CGCCCCTGTT CCAATTGATT
CAGTCGGAAA GCGGTACGAG CTGGCAGGAG ATGTACAAGG TGTTCAACAT GGGGCACCGG
TTAGAAATTT ACCTGCCCGA CGCTCACGCA CAGCAGGTTA TCGACATCGC TCAATCGTTC
GGTATCGACG CGCAGGTAAT CGGGCGGGTC GAAGCCTTCG CCGGTAAACA GGTAACGATA
CAAAGCGAAG TCGGTCAATT TGTTTATTAA
 
Protein sequence
MTDRYAQRGV SASKEDVHNA IAQLDKGLFP KAFCKIVPDT LAGDPDFCTI MHADGAGTKS 
SLAYLYWRET GDLSVWKGIA QDAVVMNTDD LICAGATGPM LLSSTIGRNK NLIPGEVIAE
IINGTEEVLQ MLRDHGIEIY STGGETADVG DLVRTVIVDS TVIARMRRDQ VISNDRIQAG
DVIVGLASFG QATYETTYNG GMGSNGLTSA RHDVLAHYLA GQYPESFDPA IDKSLIYSGS
KRLTDSVSTG TANTTVGQLI LSPTRTYAPV AKRLLDELRP QIHGMVHCSG GAQTKVLHFV
DNVHIIKDKL FPIPPLFQLI QSESGTSWQE MYKVFNMGHR LEIYLPDAHA QQVIDIAQSF
GIDAQVIGRV EAFAGKQVTI QSEVGQFVY