Gene Slin_6003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6003 
Symbol 
ID8729784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7278724 
End bp7279287 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content30% 
IMG OID 
Productcytidyltransferase-related domain protein 
Protein accessionYP_003390764 
Protein GI284040834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTG GAATAGTTCA TGGCAGATTC CAGCCATTAC ATTTGGGACA TTTAAATGAC 
TATATATTAA AAGCAAAAGA AAAGTGCGAT TTTATTATTA TAGGAATTAC TAATCCTGAC
CCAACACATA CTTTACCTGA TGAATCAAAC CTTTCAAGGA CAAGACCGGA AAACAATCCT
TTAAACTACT ATGAACGATT GGTAATTCTT CAAGATGCAA TGATAGAAGC AGGTTTGAAA
CAAAATAAAT TTACAATTAT TCCATTTCCA ATTAACTTCC CACAACTACT AAAATACTAT
ACACCAGAAG ATGCTACACA TTATTTAACT GTTTTTGACG AATGGGGCGA TAACAAAACT
AATGTTTTAA AACGTTATGG ACTTAAAACT TCAATTCTTT TTAAAAAAGA TATTTCAGAA
AAAGATATTT CGTCGACTTT GGTTAGAGAA CTAATTGTCA AAAATGGAAA CTGGAAAGAA
CTTGTGCCAA AATCGACAAT TAAATGTTTA GAAAATTATA ATATTAAAGA AAGGCTTTTA
AAAATCAGGC AACAGGCAAA ATGA
 
Protein sequence
MRIGIVHGRF QPLHLGHLND YILKAKEKCD FIIIGITNPD PTHTLPDESN LSRTRPENNP 
LNYYERLVIL QDAMIEAGLK QNKFTIIPFP INFPQLLKYY TPEDATHYLT VFDEWGDNKT
NVLKRYGLKT SILFKKDISE KDISSTLVRE LIVKNGNWKE LVPKSTIKCL ENYNIKERLL
KIRQQAK