Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5989 |
Symbol | |
ID | 8729770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7258324 |
End bp | 7259931 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_003390750 |
Protein GI | 284040820 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.852027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TCCTTATCAG CGCATCCGTT TGTCTGCTTT CTATGGCAGC ATCGGCGCAG GAAACGCAGT GGTATCTGCG TGATAAAACC GATAATACAG CCGGTATCAG TGTTGAACGC ACGTACCGTG AACTTCTTAA GGATCGTAAA CCTACACCCG TCATCGTTGC CGTCATTGAC GGTGGAATTG ATACTACCCA TGAAGATTTG CGTCGGGTAC TCTGGGTAAA TCCTAAGGAA ATAGCCGGAA ATGGGAAAGA CGATGATAAA AACGGCTATG TCGATGATGT GCATGGCTGG AACTTTATCG GTGGGAAAGA CGGCCGAAAT GTCGATTTTG AAACCGCCGA GGTTACCCGT CTTTACGCAC AGCTGAAACC AAAATACGAG GGTAAAGACC GCAAAGCGTT AAAGCCGGAT CAGCAGAAAG AGTACGATCT GTACGTAAAG ACCAAAGCTG AGGTCGAGAA AAATCAGACT AAGTACAAAA CGGAATATCA GGGAATCAGC CAGTTTTACA AGCAGTATTC GGAGGCTGTG ACTACCCTTA AGAAAGCCCT CAACGTATCT AAACTGGATA CGACTACCCT GAGTAAGGCG GCTGATACCT TAACCGACGC TGCGCTGAAA CGTCCCGTTA TGGGCATACT TCGGTTACTG CGCCAGCAGA ACGCACCGAA CACCGACGTG GTGATGGGTG AGCTGGAAAA ATACAATGAT CAGCTCAAGT CGCGCGCCGA GTACAACTAC AATCCTGAAT TCAACAGCCG CACTATTGTA GGCGATAATC CGGACGATAT GACTCAGCGG GATTACGGTA ACCCCGACAT TGCCGGGCCA CGTCCTGACC ACGGTACGCA CGTAGCCGGT ATTATAGGTG CTGACCGTAC CAACAATCTG GGTATTATGG GAATTGCCGA TGCGGTTCAG ATAATGGGCG TTCGGGCTGT GCCCGACGGC GATGAGCGCG ATAAGGACGT AGCCAATGCT ATCCGGTATG CCGTCGATAA CGGAGCGAAA ATCATCAACA TGAGCTTTGG CAAAGATTAT TCGCCCCAGC GCAAAACTGT TGAAGATGCC GAACGCTATG CGTTATCGAA AGGGGTATTA ATGATTCATG CGGCTGGTAA CGACGGAAAA GATATCGATA CCGCAGCCAA TTACCCTGCT CCCCGGTTTA TGGATGGGTC GGCCATTCCG AACGTGATTA CGGTGGGTGC CAGCGCCGAG CCGAACACCG CCGATCTGGT GGCCAGTTTC TCAAACTATG GCAAGCAGAA TGTTGATGTG TTCGCTCCGG GCAAAGATAT TTATTCGACT GTGCCGGGTA GTAAGTACGA AAACAACAGC GGAACCAGCA TGGCCTCGCC CGTAGTGGCT GGCGTGGCGG CTGTCCTGAA ATCGTACTTC CCGAAACTGA CTTACGCCGA TATTAAACGG ATTATTCTGG AATCGGCAAC GCCTTACAAA ACCAAAGTAA CAAAACCCGA ATCGACGGAT ACCGTTGACT TCTCGTCATT ATCGAAAACG GGTGGCGTTG TTAACCTGTA TGATGCTGTG AAGTTAGCCC TGGCGCAGGA TGCGGCTTCT TCAGGCAAAG GAAAATAA
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Protein sequence | MKKLLISASV CLLSMAASAQ ETQWYLRDKT DNTAGISVER TYRELLKDRK PTPVIVAVID GGIDTTHEDL RRVLWVNPKE IAGNGKDDDK NGYVDDVHGW NFIGGKDGRN VDFETAEVTR LYAQLKPKYE GKDRKALKPD QQKEYDLYVK TKAEVEKNQT KYKTEYQGIS QFYKQYSEAV TTLKKALNVS KLDTTTLSKA ADTLTDAALK RPVMGILRLL RQQNAPNTDV VMGELEKYND QLKSRAEYNY NPEFNSRTIV GDNPDDMTQR DYGNPDIAGP RPDHGTHVAG IIGADRTNNL GIMGIADAVQ IMGVRAVPDG DERDKDVANA IRYAVDNGAK IINMSFGKDY SPQRKTVEDA ERYALSKGVL MIHAAGNDGK DIDTAANYPA PRFMDGSAIP NVITVGASAE PNTADLVASF SNYGKQNVDV FAPGKDIYST VPGSKYENNS GTSMASPVVA GVAAVLKSYF PKLTYADIKR IILESATPYK TKVTKPESTD TVDFSSLSKT GGVVNLYDAV KLALAQDAAS SGKGK
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