Gene Slin_5968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5968 
Symbol 
ID8729749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7236884 
End bp7237243 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content42% 
IMG OID 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003390729 
Protein GI284040799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.930871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAT TAACAGCTAA AGAAGAAGAA GTCATGCAGG TGCTCTGGAA AATGGAACAG 
GGGTATGTAA AAGATATGGT GCCTCAATTT ACCAACCCAC CACTGCACTA CAATACGGTT
TCGACCATTG TGCGTAACCT CGAAGAAAAG GGTTATATCG GCCACAAAGC ATACGGCAAC
ACCCACGAAT ACTACCCAAT CATCAGTAAA GAAGCCTATC AGAACCGATT TGTCCTGAAG
AAAGTAGTTG ACGAATATTT TGACAACTCC TATAAGAATC TGGTAAGCTA CTTTGCACAG
AATGAGAAGA TTTCGGCCGA CGAGCTTCGG GAAATTCTGG CGATGATCGA GAAAAAATAA
 
Protein sequence
MEKLTAKEEE VMQVLWKMEQ GYVKDMVPQF TNPPLHYNTV STIVRNLEEK GYIGHKAYGN 
THEYYPIISK EAYQNRFVLK KVVDEYFDNS YKNLVSYFAQ NEKISADELR EILAMIEKK