Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5951 |
Symbol | |
ID | 8729732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7214178 |
End bp | 7215458 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | peptidase M16 domain protein |
Protein accession | YP_003390712 |
Protein GI | 284040782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG ATAGAACACA ATCGCCCGGA TTTCAGGCTA TACAGGAAAT ACGCCTGCCA GCAGTACAGT CTCACCAACT GGATAACGGA ATTCCGCTGC ACCTGATTTC GGTTGCTCAG CAGCCTGTTT TGCGGCTGGA GTGCGTATTT AATGCGGGAA CCTGGTATGA ACAGGTGCCA GGTAGCGCAT TTTTTGCCAT GAAGATGCTG GCGGAAGGTA CACCCACACG TACATCTGCC CAAATTAGCG AGTACATCGA CCGATACGGC GCTTTCCTGG AACTTAACAG CGGCCCCGAC CGTGCCAGTA TTGTCATTTA CTGCCTCAGC AGGTTTTTGC CAAATGTGCT GCCTGTGCTT CGGGAGATGC TTACTGAAGC TACCTTCCCG CAAAAAGAAC TGGACGACCT GCGGAACATC ACCCTCCAGA ACCTGCGCGT CAATTACGAG AAGAATGCTT ATCTCGCCGG GGTTCTGTTC CGGGAAAAAT TGTTTGGTAT CAACCACCCA TACGGGCGTA GTCAACGTCC CGAAAATGTC GAAAAGCTTA CCCGGCAGGA TGTAGTTGAC TTCTTTAGTC AGGTTATCAG TAACCGGCCT TTTCAGATAA TTCTGGCCGG GCAGGCCGCT GAAGATGAAC TGGCCGCGAT TAACCGTGAA CTAGGGCAGT TAACTCTTCG TACAGACGCA CTCGCGGCAT TTGACGGAAG CGCCTATTCC GACGACCGGT TGCCCATACT GGCTGATAAA CCGGACAGCG TTCAATCGTC AATCCGCGTT GGTCGCCGGT TGTTTACCCG GTCACATCCT GATTTCTTTA AAATGCTTGT TACCAATGAA ATCTTGGGCG GGTACTTTGG CTCCCGGCTC ATGAAGAATA TTCGTGAAGA GAAAGGATTT ACGTACGGAA TCTCATCGAA TATGCCTTCG TTCCGGCAGG ATGGGTATTT CCTGATCGGA ACGGATGTTA ACAAAGAAAA TACCCAGCAA ACGCTGGATG AGATCAGAAA GGAGATAAGT ATCCTGCAAA CCGAGCCGGT ATCAGCGGAT GAACTGGAAA CAGTACAGAA TTATATGGCA GGCGAATTTG TTGGATCATT GAATACACCC TTCGAAATTG CTGACCGGTA TAAAGTGGTT TTACTGGATG GAATGCCCAC AGATTTCCTG ACAACGTATA TTCAAAAAAT TCGTCAGGTA ACCCCAGCCG ATGTAATGGA GACAGCTAGC CGCTATCTGG CCCCCGAGGA TTTACGGGAA GTAGTCGTAG GTGGTAAATA G
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Protein sequence | MTLDRTQSPG FQAIQEIRLP AVQSHQLDNG IPLHLISVAQ QPVLRLECVF NAGTWYEQVP GSAFFAMKML AEGTPTRTSA QISEYIDRYG AFLELNSGPD RASIVIYCLS RFLPNVLPVL REMLTEATFP QKELDDLRNI TLQNLRVNYE KNAYLAGVLF REKLFGINHP YGRSQRPENV EKLTRQDVVD FFSQVISNRP FQIILAGQAA EDELAAINRE LGQLTLRTDA LAAFDGSAYS DDRLPILADK PDSVQSSIRV GRRLFTRSHP DFFKMLVTNE ILGGYFGSRL MKNIREEKGF TYGISSNMPS FRQDGYFLIG TDVNKENTQQ TLDEIRKEIS ILQTEPVSAD ELETVQNYMA GEFVGSLNTP FEIADRYKVV LLDGMPTDFL TTYIQKIRQV TPADVMETAS RYLAPEDLRE VVVGGK
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