Gene Slin_5950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5950 
Symbol 
ID8729731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7212876 
End bp7214078 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390711 
Protein GI284040781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA ATTTTTTCCA TGTTCTTCTC GGCGCATGTA GTTTTTTCCC GTTTGTTGTC 
TCTGCTCAAT CTCAAATAAC TACGCTTAAC GGCGCGCAGG TAAATATCCC CACCTCATCG
GTTCCGTTTT TGAACTTTAC ACCAGATGCC CGTTCGGGTG CCTTGGGAGA GGCTGGTGTA
GCCCTGGGAG AGGCTGATGC AAATGCTATT TTCTGGAACC CCTCAAAGCT GGTATTTGCC
AAGCAGGACA AAGGAGCGTC TATTTCTTAT ACACCCTGGC TGCGCAACCT GATTGGTGAT
ATGTATTACA CTTACCTAAG TGGGTATTCA AAAGTGGGTA AAAACTCAGT GGTAGGGGGC
TCACTTATGT ACTTCGATCT GGGAACGGTT GATTTTACAA CGAATCAGGG CACAACTGCC
GGGTCGTTTA ACTCCCGTGA ATATGCGATA ACCGCAACGT TTGCTCAGCG GCTCTCGCAA
AACTTTTCGC TTGCTGTTGA TCTTAAATAC CTTAGCTCGA ACCTGGCAGC GGGCAGTACA
AATGCCGGTT TGAAGCCCGG CTCAACGGCT GCGGCAGATA TTAGTGCTTA TTACCAGAAT
GAGTTTCGCG ATAACGCAAC GGGTAAGGGA ATTGGCTGGG CCTTTGGTGG TATGATTTCC
AACCTGGGTG GCCGGATCAA TTACGGCGGT ACCCAGAGTT ACTTTATTCC AACCAATCTG
CGGTTAGGCA CCCGGTTTAC CTTGTTCTCT GACCAGTATA ACAAGTTCAA TTTTGTGCTG
GACGCCAATA AACTCATGGT ACCCACGCCC GATATCCAAA CGGTGAACGG CGTGCAGACA
AACGTAAATG CGAATAAGAA CTATTTCAGT TCAGTATTCG GCTCGTTTGC CGACGCGCCC
GGTGGGTTTA GTGAAGAATT GAAAGAAATA ACTATCTCGA CGGGTATCGA GTACTGGTAT
AATGACCAGT TTGCTGCTCG GGTGGGTTAT TTCAACGAGT CGAACCAGAA AGGCGGTCGT
AAATACGTTA CAACGGGTAT CGGTCTGCGT TTACAGGATC GTTTCGGTGT AGATTTCTCG
TACCTCCTGC CCGTAAAACA AGGTAGCCCC CTAGCCGAAA CGTTTCGGAT TTCACTGTTA
TTTAACTTCA ACAAAGGCAA CCGAATTGGC GATGATGAAG CCCTTTCGGA TGATAGAAAC
TAG
 
Protein sequence
MKRNFFHVLL GACSFFPFVV SAQSQITTLN GAQVNIPTSS VPFLNFTPDA RSGALGEAGV 
ALGEADANAI FWNPSKLVFA KQDKGASISY TPWLRNLIGD MYYTYLSGYS KVGKNSVVGG
SLMYFDLGTV DFTTNQGTTA GSFNSREYAI TATFAQRLSQ NFSLAVDLKY LSSNLAAGST
NAGLKPGSTA AADISAYYQN EFRDNATGKG IGWAFGGMIS NLGGRINYGG TQSYFIPTNL
RLGTRFTLFS DQYNKFNFVL DANKLMVPTP DIQTVNGVQT NVNANKNYFS SVFGSFADAP
GGFSEELKEI TISTGIEYWY NDQFAARVGY FNESNQKGGR KYVTTGIGLR LQDRFGVDFS
YLLPVKQGSP LAETFRISLL FNFNKGNRIG DDEALSDDRN