Gene Slin_5937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5937 
Symbol 
ID8729718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7196215 
End bp7197186 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content54% 
IMG OID 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003390698 
Protein GI284040768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA TCTTATTTAC CGAGACCGGA AAACCAACCG AGATTCTCAA ATTTGCTGAC 
AGTGCCCTAC CCGAGCCCGG CCCAAATGAT GTGCGCATCA AGGTCATTGC CGCGCCAATA
AATCCGTCCG ACATCATGTT CGTACAGAAT CTCTATGGAA TTCGGCCGCA GTTGCCTTCA
GGAGCCGGGT TTGAGGGTGT GGGCATTGTG GATGCCATTG GCGAAGGCGT GCAGATGCGA
ACGGGTATAC GGGTGAGCTT CACCAGTGTG GGTACCTGGT CAGAATACGC TATTGCCCAT
CACCGGAGCC TTATTCCGGT ACCCGATGCC ATGTCGGACG AGGTGGCAGC TCAGTTGTTT
GTCAACCCGT TTACGGCTTA TGCCATGGTG CAGGATGCCG GTGTACCGGA AGGCGGCTGG
CTGATGCTCA CGGCGGCTGG CTCAGCTTTT GGTAAAATGG TGATTCAACT CTGTGCCATG
CGGGGTATCA AAACCATCGG CACCGTTCGG CGCGACGATC TTACCGATGA GTTAAAAGCC
CTCGGACTAA CCGAAGTGAT CAATACCGAA ACTGAGAACA TGGCTGCCCG CGTCAAGCAG
ATTACCGATG GTGCCGGTGT CGGCTGTGTG CTCGATGCCG TTGGCGGGCA TATCGCTACC
GAAGCCGTTA AGTGCTTGGC TAAAGGCGGA ACCATGCTTA TCTATGGGCT GATGAGTTTA
CAGGACCCTA GTCTGAACGC CGGTCTGCTG ATTTTTAGAG AACTGACCGT AAAGGGCTTC
TGGCTTACAG ACTGGATGCG TCGGGTAGAT AGTCAGACCC GGCAGGAAGT GGCACAAAAT
GTGATAGGTT TGCTGGCATC GGGCAAAATT CAATTGCCGG TGGAGGCATC GTATCCACTG
GAGCAAATCA CCGAAGCCGT CGAACACGCC GACCGGCCGG GGCGCCGAGG GAAAATCCTG
TTAAAGCCCT AA
 
Protein sequence
MKSILFTETG KPTEILKFAD SALPEPGPND VRIKVIAAPI NPSDIMFVQN LYGIRPQLPS 
GAGFEGVGIV DAIGEGVQMR TGIRVSFTSV GTWSEYAIAH HRSLIPVPDA MSDEVAAQLF
VNPFTAYAMV QDAGVPEGGW LMLTAAGSAF GKMVIQLCAM RGIKTIGTVR RDDLTDELKA
LGLTEVINTE TENMAARVKQ ITDGAGVGCV LDAVGGHIAT EAVKCLAKGG TMLIYGLMSL
QDPSLNAGLL IFRELTVKGF WLTDWMRRVD SQTRQEVAQN VIGLLASGKI QLPVEASYPL
EQITEAVEHA DRPGRRGKIL LKP