Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5923 |
Symbol | |
ID | 8729704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7177414 |
End bp | 7178799 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003390684 |
Protein GI | 284040754 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAA CCGGCATCGA GATTGGCGAC TACCGTCAGT TTAAGAATAT AAAGTTTGAT TTTACGTATC CCAAAGGGCA CCCAAAAGAA GGACAGCCGT TAGAGAAGGT GTGTTTTATT GGGCAGAGTG GTACGGGAAA GACGACGTTG CTGAATGTGA TTTGGGATTT TTTCCAAGTC TTAAATGATG GACATCAGCT TTCCGCTAAT AGATTTTCGA TTCCTTCAGT AAGCCATTAC GAAACATTTA AAGCCAGTAT TTCTGTACAT GCAAAAATCT TTGATCATGA AGTTAGCTTC GGCACACAAT CTCTTCGTAG TGCTTCAGAT TTATACATAA ATAATGATAA AGATATTGCA GGTAGTAGTT TGGATTGGAT TAAGTCCCAA CCTATCGATG TTCACAATGC TATTAAATCT TACAATAAGC TATGCTTATA CATTGACGAT TCTGCTCTTA ATCATGTATA CAACCTTACA GCAAATAGAA ATGATGATAA CAGGGCCTAT ATCGCTAGCA CTGATGAAAT TTTTCTTTCT AATGAGAAAA GACAAGAAGC TATTGATCGG CTATCACAAT CAAAAACAAT GGCCTTCCGT TCCTTCGATG GGCGTTACCT ATGGTCTTAT TTACTAAGTG ATATTGAAAA ATATGACGAA AGCCTGAAGA AAGTTGCGAT TGACCTTATT CAGAAAAATG GCAGCTTTTC TCCGAATCGC TTATCCGAGA GTCTAAATAA ATGGCAAACA GAGAACCCTA ATCCTAGGAT TGATATAGCT AAAAATTGCT TAAATTCTAT TTTAAAGGAT TTTTTCCTTG AAGTTGATAC AGAAGGTACA GAGGCCTTAA TTGTAGTAAA GACAAAAAGT GGCAAACAAC TATCCTTCAA TGGTATAAGT ACTGGTACTA AGCAACTATT GGTAACTGCC ATTCCTATTT ATAAAAGCCA AATCAATAAG GGGGTTGTGT TGTTCGATGA ACCTGAGAGA TCTCTATTTC CAGACATCCA GCGGGGTTTA ATTGATTATT ACACCTCCCT TGCCTCTGAA GCTCAATTCT TTTTCGCTAC GCACTCGCCA ATCATCGCAT CGGCCTTTGA GCCTTGTGAG CGATTTATCC TTTCTTTTGA TGACAACGGC GAAGTTCAAG TTAAGAACGG AATAGCTCCC ATTGGCGATG ATCCAAATGA TATTTTACGC CAGGACTTTG GCATGAGTCC TCTAATGCTA GATGAAGGAG TAGAGCAATA CAGGAAATAT TTAGACTTGG TTACTCAAAT CAAAACTGAG TCTGATATAA ACCGAAAAAT GGAATTAATC GCTGAGCGTT CAGCAATAGG AAATAAGTAT AATTTCTCTG TTACTAGTAC GGATGAGACG AATTGA
|
Protein sequence | MKITGIEIGD YRQFKNIKFD FTYPKGHPKE GQPLEKVCFI GQSGTGKTTL LNVIWDFFQV LNDGHQLSAN RFSIPSVSHY ETFKASISVH AKIFDHEVSF GTQSLRSASD LYINNDKDIA GSSLDWIKSQ PIDVHNAIKS YNKLCLYIDD SALNHVYNLT ANRNDDNRAY IASTDEIFLS NEKRQEAIDR LSQSKTMAFR SFDGRYLWSY LLSDIEKYDE SLKKVAIDLI QKNGSFSPNR LSESLNKWQT ENPNPRIDIA KNCLNSILKD FFLEVDTEGT EALIVVKTKS GKQLSFNGIS TGTKQLLVTA IPIYKSQINK GVVLFDEPER SLFPDIQRGL IDYYTSLASE AQFFFATHSP IIASAFEPCE RFILSFDDNG EVQVKNGIAP IGDDPNDILR QDFGMSPLML DEGVEQYRKY LDLVTQIKTE SDINRKMELI AERSAIGNKY NFSVTSTDET N
|
| |