Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5918 |
Symbol | |
ID | 8729699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7170894 |
End bp | 7173383 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | ATP-dependent protease La |
Protein accession | YP_003390679 |
Protein GI | 284040749 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTTAG ACCAAGATTT AGCTACCCGT TTGTTAATGA CCGATTTCGA TTCGGACAAT TTGGAAATTG TGCCGCTTGG GTCGCCGGAG GGGTTAGATG ATGATTACGA ACTGCCGGCA AATCTTCCCA TTTTGCCGGT TCGCAATACC GTTTTGTTTC CAGGAATGGT TATCCCCGTT ACGGTTGGAC GGTCGAAGTC AATCCGATTA GTAAAAAAAG CGTATAAGGG GAACAGAATT ATAGGTGTTG TTGCTCAGTT GAATCAGCAA AAAGACGAAC CTACGGTCGA TGATCTTTAT CGGTTCGGGA CAGTCGCCTA TATCATCAAG ATGATTACGT TGCCCGATGG CAACATAACC ATAATCATTC AGGGTAAGAA GCGTTTTGAA GTTCAGCAAA TCACGCAGGA GGAGCCGTTT ATGACGGCTC AGGTCCGGCA AATTGACGAC TCATTCCCTA ATGTAACCAA GAAGGAAGGT AAAGCTCTGT TGCAATCGCT GAAAGACGCT GCGTATAAGA TGTTGCGTCT GAATCCGGAA ATTCCGCAGG AAGCCCGCAT TGCGCTCGAT AACATCGAAA GCCCGAACTT CCTGCTGCAC TTTTTATCCT CGAACGTTAA TGCCGATGTA GCGGATAAAC AGCGGCTTCT GGAAACCCTC GAAGGTAACC AGCAGGCTAA CCTGCTCCTT GAGTTTATGC TTCGCGAAGT GCAGTTGCTC GAACTCAAGC GCGAAATTCA GTCGAAAGCG TCGTCTGACC TCGACCAGCA GCAGCGCGAT TACTACCTCC GTCAGCAGAT GAAGGTTCTC CAGGATGAAC TGGGGATGGA AAACCCGGAT CGGGATATCG ACGAACTACG CATTAAAGCT GACCGCAAGA AATGGTCGAG CGAGGTGCGG GCTCATTTCG ATAAGGAACT GACCAAGTTA CAGCGCATAA ATCCCATGGC ACCCGAGTAT CCGGTTACCA TGAACTACGT TGAGCTGATG GTCGACCTGC CCTGGAATGA ATACACCAAG GACAACTTCG ACCTGAAGCG CGCTCAGAAA ATTTTGGATA CGGATCATTT CGGTCTGGAA AAAGTAAAAG AACGGATCAT TGAATACCTC GCCGTTCTGA AGCTTAAAAA CGACATGAAA GCGCCAATCC TTTGCCTATA CGGCCCACCG GGTGTGGGTA AAACCTCGCT GGGAAAATCG GTAGCAAAGG CGCTGGGCCG GAAATATAGC CGGATGGCCC TGGGTGGCGT ACACGACGAA GCCGAAATTC GTGGTCACCG CAAAACATAT ATCGGCGCCA TGCCGGGCAA AGTCATTCAG AATATTCGCA AATGCGGTAC GGCCAACCCC GTATTTATTC TGGACGAAAT CGACAAGGTC AGTTCCGATT TCCGGGGCGA CCCATCGTCG GCCTTGCTCG AAGTACTGGA CCCTGAGCAG AACTCGACGT TCATGGACAA TTACCTCGAA ACCGAGTTCG ACCTCTCGCG GGTATTGTTC ATTGCCACGG CTAACTCGCT CGACACCATC CACCCCGCCC TGCGCGACCG GATGGAAATC ATCGACATTG CGGGGTATAC CGTTGAGGAG AAAGTGCAGA TTGCCAAGAA ATACCTCATT CCCAAACAAC GCCGGGATCA CGGCCTCAAG CCAAAGGACT TGGCCTTCGA CGACAAAGCC GTTTTACGCA TCATTGAAGG ATATACCCGT GAATCGGGCG TCCGGAATCT GGAGCAGAAA ATTGGCGCGT TGATCCGGAA AGTGGCCAAG TCCATTGCTA TGGAGGAGGA ATACAACCAT ACAATTAAAG TCAATGACAT CCCCAAAATG CTCGGCGTCG AAATCTTCGA TAAAGAACTC TACGCTGATG ATGACATTGC TGGTATTGTA ACGGGTCTGG CCTGGACACA GGTTGGGGGC GAAATTCTAT TGATCGAATC CAGTCTGAGC CGGGGCAAGG GAGTGCTTAC ATTATCGGGG CAACTTGGTG ATGTAATGAA GGAATCGGCT ATTACGGCCC TCTCCTACCT GAAAGCCCAT GCCGACGATC TGGGCATCGA TTATCGCATT TTCAGCCATT ACGACCTGCA CATCCACATT CCTGCCGGTG CTGTTCCTAA AGACGGACCT TCGGCTGGGA TTACCATGCT CACGTCGATG ACATCTATTT ACACCCAGCG TAAAGTGAAG CCTTATCTGG CTATGACCGG TGAGGTGACC CTGCGGGGTA AAGTGTTGCC CGTAGGTGGT ATCAAGGAAA AAATTCTGGC GGCTAACCGG GCAGGTATTA AAGAGCTTAT CCTTTGTTCG AAAAACCGAA AAGACATTGA GGAGATCAAC CAGTCGTATA TTAAAGACCT GGTGTTCCAC TATGCCGATA CGGTCGATCA GGTGCTTGAA ATCGCTTTAC TTCCTGGTAA GGTTGGTAAG CCGATGAAGT TTATCCTTCC TGAAGAAAAA GAGCCGCGCG AAGTAGAGAA AGTATATTGA
|
Protein sequence | MHLDQDLATR LLMTDFDSDN LEIVPLGSPE GLDDDYELPA NLPILPVRNT VLFPGMVIPV TVGRSKSIRL VKKAYKGNRI IGVVAQLNQQ KDEPTVDDLY RFGTVAYIIK MITLPDGNIT IIIQGKKRFE VQQITQEEPF MTAQVRQIDD SFPNVTKKEG KALLQSLKDA AYKMLRLNPE IPQEARIALD NIESPNFLLH FLSSNVNADV ADKQRLLETL EGNQQANLLL EFMLREVQLL ELKREIQSKA SSDLDQQQRD YYLRQQMKVL QDELGMENPD RDIDELRIKA DRKKWSSEVR AHFDKELTKL QRINPMAPEY PVTMNYVELM VDLPWNEYTK DNFDLKRAQK ILDTDHFGLE KVKERIIEYL AVLKLKNDMK APILCLYGPP GVGKTSLGKS VAKALGRKYS RMALGGVHDE AEIRGHRKTY IGAMPGKVIQ NIRKCGTANP VFILDEIDKV SSDFRGDPSS ALLEVLDPEQ NSTFMDNYLE TEFDLSRVLF IATANSLDTI HPALRDRMEI IDIAGYTVEE KVQIAKKYLI PKQRRDHGLK PKDLAFDDKA VLRIIEGYTR ESGVRNLEQK IGALIRKVAK SIAMEEEYNH TIKVNDIPKM LGVEIFDKEL YADDDIAGIV TGLAWTQVGG EILLIESSLS RGKGVLTLSG QLGDVMKESA ITALSYLKAH ADDLGIDYRI FSHYDLHIHI PAGAVPKDGP SAGITMLTSM TSIYTQRKVK PYLAMTGEVT LRGKVLPVGG IKEKILAANR AGIKELILCS KNRKDIEEIN QSYIKDLVFH YADTVDQVLE IALLPGKVGK PMKFILPEEK EPREVEKVY
|
| |