Gene Slin_5917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5917 
Symbol 
ID8729698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7169548 
End bp7170795 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content54% 
IMG OID 
ProductN-acyl-D-glucosamine 2-epimerase-like protein 
Protein accessionYP_003390678 
Protein GI284040748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGATT TTCCGAAACT TTCCGCTACC TATCAGCAGG CCTTGTTAAG ACAGGTTGTT 
CCCTTCTGGC TCAAAAACAG CCGGGATGAA CTGTGTGGTG GTTATTTCGA TCTGTTATCA
ACGTTGGGAG AGGTAATCGA GGGCGATAAG TTCGTGTCGC TGCAAGCCCA ACAGGTGTGG
GCTTTTTCCT GGCTGTATAC TAACCTCGAC GGACAGACTG CCTGGCTCGA ACATGCCCGA
CATGGTGCCG CTTTCCTGAG CCAGTTTGCG CATCAGGACA CGCTGGACTG CTATGCCCGG
CTCGACCGGC GAGGTCGCCC GGTTCATCAG CCAGCCGATT TAATTCCGGA TTGTTTTGCA
ACGATGGCTT ACGCGCAACT CCATCGCGCA ACCGGAGAAG ACGAGTGGGC AATGCTGGCA
AAGCAAACGC TTACCAATTT GCTCGAACGC CGGGCCGATA CCAGGGCTGA GCAGGCACGA
CATGTCGGCA ACTTTCAGCA CCTACAACAG TTAAGCGAAA CGGCGGCCCT GCTCAAACTG
GTACTGGACA TGCAGCCCCT GCTGGATGAA GAAAGAGGAA AAGAAGCTAT CGATCTGATC
ATACACGAGA TCCAGCACGA GTTTCTGGAT CGACGTTCCG AAACACTCCT TGACAGCGTA
TTGCCGGAAG GCGCATTCGT TAACACGCCC GAAGGCCGAC GCTTGAATGT AGGGTTAACG
TTCCAAACGG CTGGCTATCT CCTCGACTTC TACGCAGAGA GTGCTTCGGT CAGGAATACG
CCGGGTGTCA ACACAAACCG TAAGCTGGCC ATACAGGTAA CGGGCTGGTG TCTGCGTCTG
TGTGAGCAAG CCTGGGACGA GACCAATGCG GGCCTGAATC AGTACATTGA TTTCAAGCAG
CAGGCATCAA TTTTTCCGGA CTGGCAGCAA AAATGGGGCT GGGTACAGCT GGAAGCCTTG
ATGGCCTTGT TGAAGAGTTA TGTACAAACC CGTCAGCCCG ACTGCCTGAA ATGGTTCAAA
CGCATTCATG ATTACACCTT TCAGCACTTC CCCGATCCCA AACAGACGGG CTGGCACCTG
GTGCTGGACA CATACGCACA CCCCCTGCTT GCAGCTAAAG CAATTCCATC GGTCGGTTGC
TACTCACTTA TCCGATGCCT GGCCGAAACA AGTCAGTTGC TGACCAAATG TGAACCGCTG
CAGAAAACGC AGCGAACCGG CCGGGCGGGT ATTTCGCTTA ATTCTTAA
 
Protein sequence
MLDFPKLSAT YQQALLRQVV PFWLKNSRDE LCGGYFDLLS TLGEVIEGDK FVSLQAQQVW 
AFSWLYTNLD GQTAWLEHAR HGAAFLSQFA HQDTLDCYAR LDRRGRPVHQ PADLIPDCFA
TMAYAQLHRA TGEDEWAMLA KQTLTNLLER RADTRAEQAR HVGNFQHLQQ LSETAALLKL
VLDMQPLLDE ERGKEAIDLI IHEIQHEFLD RRSETLLDSV LPEGAFVNTP EGRRLNVGLT
FQTAGYLLDF YAESASVRNT PGVNTNRKLA IQVTGWCLRL CEQAWDETNA GLNQYIDFKQ
QASIFPDWQQ KWGWVQLEAL MALLKSYVQT RQPDCLKWFK RIHDYTFQHF PDPKQTGWHL
VLDTYAHPLL AAKAIPSVGC YSLIRCLAET SQLLTKCEPL QKTQRTGRAG ISLNS