Gene Slin_5914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5914 
Symbol 
ID8729695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7164922 
End bp7166688 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content55% 
IMG OID 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_003390675 
Protein GI284040745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAA TCGCCAGTAT TAAACCGGAA ACCGCTCACG CAGTGGATAC AGCCCCAGCG 
GTTGCCCCGG ACGCTACATA CATCAACGGC TCGCACGCCC TGATGCGATG CCTGCTAGCC
GAAGGCGTCG ATACCATTTT CGGTTATCCG GGCGGTGCCA TCATGCCCGT TTACGATGCC
CTTTACGATT ACCAGGATCA GATAAACCAT ATTCTGGTAC GTCACGAGCA GGGGGCCGGT
CATGCCGCCC AGGGCTACGC CCGCGTATCG GGCCGGGCTG GCATCTGTCT TGTTACTTCG
GGGCCAGGAG CCACCAATCT AGTAACGGCC ATTGCCGATG CCCTGATCGA CTCTACGCCA
CTGGTTTGTA TTGTTGGGCA GGTTGGCAGA AAACTGTTAG GAACCGATGC GTTTCAGGAA
GCGGATGTCA TGGGCGTTAC CATGCCCATC ACCAAGTGGA ATTACCAGAT CACAGATCCG
AACGAAGTAC CAGAGATCTT ATCGAAAGCC TTTTACATCG CGCAGTCGGG TCGGCCGGGG
CCTGTTCTGA TCGATATGAC CAAAAGCTCG CAGCTGGAGT TAATGACGAA GCCTTTCGTG
TACGAACGCT GCCAAAGTCT GGTAAGTTAC CGGCCACGAC GAGTTCCGAA ACAGGAGCAG
GTAGAAGCAG CCGCTACGCT GATTAATTCG GCCAAGCGCC CTTACATTTT TGCCGGTCAC
GGCGTTCAGA TCGCCAAAGC GGAAGCCGAA TTGATTGAGT TCGCCGAGAA AACAGGCATT
CCGGTGGCCA CAACCCTGCT GGGGCAATCG ACGATTTCGA CCAATCACCC CTTGTATGTT
GGCTGGCTGG GTATGCACGG CAACTACGGC CCGAATGTCA TGACGGATCA GGCCGATGTG
ATCATCGCCA TTGGTATGCG CTTCGACGAC CGCGTAACGG GCGACGCCAG CAAGTACATC
AAACAGGCGA AAGTCATTCA CATCGAAATC GACCCATCGG AGATTGACAA GATCATCCGG
GCCGATGCTC CCGTGGTGGG CGATGCCAAA GAAGTCCTGA AAGCGTTGTT ACCCCTCGTG
AAGCCAAATG ACCATACGGT ATGGCGTAAC GAGTTCCGTA AATATGATGC CATCGAGAAC
GAGACTATTA CGGTTCCTGA ACTGACAAGC CTGGACGGCA AAATCAGAAT GGCGGAAGTC
ATCGACATGC TGTCGACGAA AACAAAAGGC GAAGCCGTTC TCGTAACCGA CGTAGGCCAG
CACCAGATGA TGGCATCGCG CTATTACCAG TTCCGTCGGC CCAACAGCCT GGTTACGTCG
GGAGGGATGG GCACTATGGG CTTTGCCTTA CCGGCCGCTT TCGGTGCGCA GGTTGGCGCT
CCAGACCGTC AGGTGGTAGC CATCATTGGC GACGGTTGCT TCCAGATGAC CTTGCAGGAA
CTGGGCACTA TTGTGCAGAA CAAGCAACCC GTTAAGGCCA TCATCCTGAA CAATAACTTT
CTGGGCATGG TACGCCAGTG GCAGCAGTTG TTCCACGAAC GGCGCTATTC GTTCGTAGAA
CTACAGAATC CAGACTTCAT TACCATTGCC AGGGGTTTTG GTATGGACGG CCAAACCTGC
GACCAGCGGG ATAACCTCTC CGACGCACTC GACACGCTGC TGGCCCATGA AGGCCCATTC
CTGCTCGAAG TGATCGTTGA AAAAGAGGAG AACGTATTCC CGATGGTTCC CGCCGGGGCC
AGCGTTTCGC AGATTAGACT TAAATAA
 
Protein sequence
MEAIASIKPE TAHAVDTAPA VAPDATYING SHALMRCLLA EGVDTIFGYP GGAIMPVYDA 
LYDYQDQINH ILVRHEQGAG HAAQGYARVS GRAGICLVTS GPGATNLVTA IADALIDSTP
LVCIVGQVGR KLLGTDAFQE ADVMGVTMPI TKWNYQITDP NEVPEILSKA FYIAQSGRPG
PVLIDMTKSS QLELMTKPFV YERCQSLVSY RPRRVPKQEQ VEAAATLINS AKRPYIFAGH
GVQIAKAEAE LIEFAEKTGI PVATTLLGQS TISTNHPLYV GWLGMHGNYG PNVMTDQADV
IIAIGMRFDD RVTGDASKYI KQAKVIHIEI DPSEIDKIIR ADAPVVGDAK EVLKALLPLV
KPNDHTVWRN EFRKYDAIEN ETITVPELTS LDGKIRMAEV IDMLSTKTKG EAVLVTDVGQ
HQMMASRYYQ FRRPNSLVTS GGMGTMGFAL PAAFGAQVGA PDRQVVAIIG DGCFQMTLQE
LGTIVQNKQP VKAIILNNNF LGMVRQWQQL FHERRYSFVE LQNPDFITIA RGFGMDGQTC
DQRDNLSDAL DTLLAHEGPF LLEVIVEKEE NVFPMVPAGA SVSQIRLK