Gene Slin_5912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5912 
Symbol 
ID8729693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7163302 
End bp7164345 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content53% 
IMG OID 
Productketol-acid reductoisomerase 
Protein accessionYP_003390673 
Protein GI284040743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.75759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA TTAATTTCGG AGGAGTTGAG GAACAAGTAG TAACACGGGA AGAATTTCCG 
TTAGAAAAAG CCCGTGAGGT GCTGGCCAAT GAAACCATTG CGGTTATTGG GTATGGCGTA
CAGGGTCCCG GCCAGTCGTT AAATATGCGC GACAATGGCT TCAACGTTAT CGTTGGACAA
CGTAAAGGCA AAACATACGA TAAAGCCGTT GCTGATGGCT GGGTGCCTGG CGAAACGCTG
TTCGAAATTG AAGAAGCGTT GGAAAAAGGT ACGATCATTT GCTTCCTGCT CTCCGATGCC
GCTCAGATTG AACTGTGGCC AACGGTGAAA GCTGCGCTTA AACCCGGCAA ATCGCTGTAT
TTCTCGCACG GCTTTGGCGT AACGTATAAA GAAAAAACCG GTATTGTTCC ACCTGCTGAT
GTCGATGTAT TCCTCGTAGC TCCCAAAGGG TCGGGCACGT CGCTGCGTCG CCTGTTCGTA
GAAGGCAAAG GGCTGAACTC CAGCTTTGCT ATCTACCAGG ATGCTTCGGG CAACGCACGC
ACCAAAGCCA TCGCTATGGG TATCGGCGTA GGCTCGGGCT ACCTGTTCGA AACTGATTTC
TACAAAGAAG TAACCTCCGA CCTGACCGGC GAGCGTGGTA CGCTGATGGG TGCCATTCAG
GGTATCTTTG CCGCTCAGTA TGAAGTACTG CGCGCCAACG GCCACAGCCC TTCGGAAGCC
TTCAACGAAA CGGTTGAAGA GCTGACCCAG TCGCTGATGC CGCTGGTAGC CGAAAACGGT
ATGGACTGGA TGTACGCCAA CTGTTCGACA ACGGCCCAGC GCGGTGCCCT CGATTGGTGG
AAGCCTTTCC GCGATGCGAC CAAGCCCGTA TTCGAGCAAC TGTACAACTC AGTAAAAACG
CAGGAGCAGG CCGAAATCAG CATTACGCGT AACTCGCAGC CCGACTACCG CGAAAAACTG
GAAGTTGAAC TGGCCGAACT GCGCGAATCA GAAATGTGGC AGGCGGGTAA AGCTGTTCGT
TCACTGCGTC CGGAGCGGAG CTAA
 
Protein sequence
MATINFGGVE EQVVTREEFP LEKAREVLAN ETIAVIGYGV QGPGQSLNMR DNGFNVIVGQ 
RKGKTYDKAV ADGWVPGETL FEIEEALEKG TIICFLLSDA AQIELWPTVK AALKPGKSLY
FSHGFGVTYK EKTGIVPPAD VDVFLVAPKG SGTSLRRLFV EGKGLNSSFA IYQDASGNAR
TKAIAMGIGV GSGYLFETDF YKEVTSDLTG ERGTLMGAIQ GIFAAQYEVL RANGHSPSEA
FNETVEELTQ SLMPLVAENG MDWMYANCST TAQRGALDWW KPFRDATKPV FEQLYNSVKT
QEQAEISITR NSQPDYREKL EVELAELRES EMWQAGKAVR SLRPERS