Gene Slin_5899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5899 
Symbol 
ID8729680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7150027 
End bp7150719 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID 
ProductMethyltransferase type 11 
Protein accessionYP_003390661 
Protein GI284040731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.331708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.516672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG CCAAACAAAC GGCAGAAAAG GTAGATTACA ACGGGGCCGA CAATCTGGCC 
ATGATGAGTC ACGCCATAAA TTACAACGGA GGTCTCTTCA AATGGGTATC AAGCGATATT
CGACCCGGTG AAGCCATCCT GGATTTCGGT GCGGGCAATG GTGAATACGC TAACCGGTTC
CCGGCTGGTG CCGTTGATGC CGCCGAGATT GACCCGGAAC TACTGCCGCT GATCAAGCAA
CCCGTTTATA CGGACATCAG CACATTGGCC AAAACCTACG ACTTGATCTA CACGATCAAC
GTCCTGGAGC ACATCGAACA CCACGGCGAA ATCGTAAAGG AGTTATATAA AAAACTCAAG
CCGGGCGGCC GGATCAAGGT TTTTGTTCCA GCCCGTCAGG AGATCTTCAG TAATATGGAT
GAACACGTAG GGCATTACCG GCGCTACGAC AAGAAGCTGG TTCGCCAGAT TCTGGAAGAT
GCCGGACTGC GCGTTACCGA CTGCCGGTAT TATGACTTTG CAGGCTATTT CATCTCTCTG
ATCTACAAAT GGCTTGGCAA AGACGGCCGG ATTACCAAAG AATCGGTCAT TTTTTACGAC
CGTGTTATCT TTCCGGTAAG CCGTTTGTTT GATAAACTTA CCGGTGGGCA GGTCATTGGA
AAGAACGTCA TTGCCGAAGC GGTGAAATCG TAG
 
Protein sequence
MSQAKQTAEK VDYNGADNLA MMSHAINYNG GLFKWVSSDI RPGEAILDFG AGNGEYANRF 
PAGAVDAAEI DPELLPLIKQ PVYTDISTLA KTYDLIYTIN VLEHIEHHGE IVKELYKKLK
PGGRIKVFVP ARQEIFSNMD EHVGHYRRYD KKLVRQILED AGLRVTDCRY YDFAGYFISL
IYKWLGKDGR ITKESVIFYD RVIFPVSRLF DKLTGGQVIG KNVIAEAVKS