Gene Slin_5897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5897 
Symbol 
ID8729678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7147419 
End bp7148558 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content50% 
IMG OID 
Productpyruvate carboxyltransferase 
Protein accessionYP_003390659 
Protein GI284040729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.277778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.176603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC GAGTTTACAT TTTTGATACT ACCCTGCGCG ACGGTGAGCA AGTACCGGGC 
TGCCAGTTAA CCACTGAGGA GAAAATTGTA GTAGCGAAAG AACTGGAGCG GATGGGCGTT
GATGTTATCG AAGCTGGTTT TCCTATTTCG AGTCCCGGCG ACTTCCGCTC GGTCGTTGAA
ATATCAAAAG CAGTGACTGA GCCTACCATC TGTGCCCTCA GCCGTGCAGT AAAGGGAGAC
ATCGACGCTG CTGGCGAAGC CCTCAAATGG GCCAAACGCG GGCGCATTCA TACCGGTATT
GGTTCGTCAG ACATTCATAT TCGGAATAAG TTTAACAGCA CACGGGAAAA CATTCTTGAA
CAGGCCATTG CTGCGGTAAA ACATGCTAAA TCCTTCGTTG AAGATGTAGA GTTTTATGCT
GAAGATGCTG GCCGTGCCGA TCTTGCTTTT CTTGCACAAT TAACTGAAGC AGTTATCAAA
GCAGGAGCTA CAGTGGTTAA TATTCCCGAT ACGACTGGCT ATTGCCTGCC CGACGAATAC
GGCAAGAAAA TAGCCTACAT CTACGAGCAC GTTTCCAACG TTCACCAGGC CACTATTTCG
ATCCATTGTC ATAACGATCT GGGCTTAGCT ACGGCTAATA CGCTGGCAGG CGTAATGAAC
GGCGCACGGC AAGTCGAAGT AACCATGAAT GGCATTGGTG AACGCGCTGG TAATACGTCG
CTGGAAGAGG TGGTAATGGC CTTGAAAGTG AAGAAGGAGC TTGGCTTGCA CACCAACATT
GACACCACTC GCCTTTTCCC CGTTAGCAAC CTTGTATCGC AAATGATGCG GATGCCTGTC
CAGGCTAATA AAGCTATTGT TGGCCGTAAT GCCTTTGCGC ACTCGTCAGG CATTCATCAG
GATGGCTTCC TGAAGCACTC CGAGAACTAT GAAATAATGA ATCCTCACGA TGTTGGTGTG
CCCAAGTCCT CCATCGTGCT GACTGCCCGT AGTGGCCGCC ATGCCTTGAA ACACCGGCTT
GAGCTACTTG GCTTCCGCTA CGACAAGCCA ACGCTCGACG GCATATATAC ACGGTTCCTG
GACATGGCCG ATGTTCGAAA AGAAGTTAAC GATAAGGACT TGATGGAACT AGTCCGTTGA
 
Protein sequence
MSQRVYIFDT TLRDGEQVPG CQLTTEEKIV VAKELERMGV DVIEAGFPIS SPGDFRSVVE 
ISKAVTEPTI CALSRAVKGD IDAAGEALKW AKRGRIHTGI GSSDIHIRNK FNSTRENILE
QAIAAVKHAK SFVEDVEFYA EDAGRADLAF LAQLTEAVIK AGATVVNIPD TTGYCLPDEY
GKKIAYIYEH VSNVHQATIS IHCHNDLGLA TANTLAGVMN GARQVEVTMN GIGERAGNTS
LEEVVMALKV KKELGLHTNI DTTRLFPVSN LVSQMMRMPV QANKAIVGRN AFAHSSGIHQ
DGFLKHSENY EIMNPHDVGV PKSSIVLTAR SGRHALKHRL ELLGFRYDKP TLDGIYTRFL
DMADVRKEVN DKDLMELVR