Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5897 |
Symbol | |
ID | 8729678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7147419 |
End bp | 7148558 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | pyruvate carboxyltransferase |
Protein accession | YP_003390659 |
Protein GI | 284040729 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.277778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.176603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGC GAGTTTACAT TTTTGATACT ACCCTGCGCG ACGGTGAGCA AGTACCGGGC TGCCAGTTAA CCACTGAGGA GAAAATTGTA GTAGCGAAAG AACTGGAGCG GATGGGCGTT GATGTTATCG AAGCTGGTTT TCCTATTTCG AGTCCCGGCG ACTTCCGCTC GGTCGTTGAA ATATCAAAAG CAGTGACTGA GCCTACCATC TGTGCCCTCA GCCGTGCAGT AAAGGGAGAC ATCGACGCTG CTGGCGAAGC CCTCAAATGG GCCAAACGCG GGCGCATTCA TACCGGTATT GGTTCGTCAG ACATTCATAT TCGGAATAAG TTTAACAGCA CACGGGAAAA CATTCTTGAA CAGGCCATTG CTGCGGTAAA ACATGCTAAA TCCTTCGTTG AAGATGTAGA GTTTTATGCT GAAGATGCTG GCCGTGCCGA TCTTGCTTTT CTTGCACAAT TAACTGAAGC AGTTATCAAA GCAGGAGCTA CAGTGGTTAA TATTCCCGAT ACGACTGGCT ATTGCCTGCC CGACGAATAC GGCAAGAAAA TAGCCTACAT CTACGAGCAC GTTTCCAACG TTCACCAGGC CACTATTTCG ATCCATTGTC ATAACGATCT GGGCTTAGCT ACGGCTAATA CGCTGGCAGG CGTAATGAAC GGCGCACGGC AAGTCGAAGT AACCATGAAT GGCATTGGTG AACGCGCTGG TAATACGTCG CTGGAAGAGG TGGTAATGGC CTTGAAAGTG AAGAAGGAGC TTGGCTTGCA CACCAACATT GACACCACTC GCCTTTTCCC CGTTAGCAAC CTTGTATCGC AAATGATGCG GATGCCTGTC CAGGCTAATA AAGCTATTGT TGGCCGTAAT GCCTTTGCGC ACTCGTCAGG CATTCATCAG GATGGCTTCC TGAAGCACTC CGAGAACTAT GAAATAATGA ATCCTCACGA TGTTGGTGTG CCCAAGTCCT CCATCGTGCT GACTGCCCGT AGTGGCCGCC ATGCCTTGAA ACACCGGCTT GAGCTACTTG GCTTCCGCTA CGACAAGCCA ACGCTCGACG GCATATATAC ACGGTTCCTG GACATGGCCG ATGTTCGAAA AGAAGTTAAC GATAAGGACT TGATGGAACT AGTCCGTTGA
|
Protein sequence | MSQRVYIFDT TLRDGEQVPG CQLTTEEKIV VAKELERMGV DVIEAGFPIS SPGDFRSVVE ISKAVTEPTI CALSRAVKGD IDAAGEALKW AKRGRIHTGI GSSDIHIRNK FNSTRENILE QAIAAVKHAK SFVEDVEFYA EDAGRADLAF LAQLTEAVIK AGATVVNIPD TTGYCLPDEY GKKIAYIYEH VSNVHQATIS IHCHNDLGLA TANTLAGVMN GARQVEVTMN GIGERAGNTS LEEVVMALKV KKELGLHTNI DTTRLFPVSN LVSQMMRMPV QANKAIVGRN AFAHSSGIHQ DGFLKHSENY EIMNPHDVGV PKSSIVLTAR SGRHALKHRL ELLGFRYDKP TLDGIYTRFL DMADVRKEVN DKDLMELVR
|
| |