| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5894 |
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| Symbol | |
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| ID | 8729672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7136893 |
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| End bp | 7139982 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | DNA repair ATPase-like protein |
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| Protein accession | YP_003390656 |
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| Protein GI | 284040726 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0510725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00862936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATACCCA TTAAACTGTC AATTCAAGGA CTCTATTCAT ATCAGGACTT ACAGGAAATT
GATTTCCAGC AATTAATTGG TTCGAGTGTT TTTGGCATCT TTGGCAAGGT GGGCAGTGGC
AAAACGTCGC TGCTGGAAGC TATAAGCTTT GCGTTATACG GCGAAACGGA ACGGCTGAAC
AGTCGCGACA ATCGTCAGTA TAATATGATG AATTTAAAGT CGAAGCACCT GATCATCGAC
TTTCAGTTTC AGGCCGGGCC GGAGCAGCAG CTATACAAGT TTGTTTACGA AGCGAAACGT
CATCCCAAAA AGCATCATGA AATAGGGCCT GGCGAACGCC GGATGTTTAT TCGCCAGGGC
GATGAATGGC AACCCATTGG GAATGAGAAA GAAGATATAG CCGTTCTGTC GAAGCAGATT
CTGGGTCTGG ACTACGATAA TTTCAAGCGG ACCATCATCA TTCCCCAAAA CCAGTTTCGG
GAGTTTCTGG AGCTTAGTCC CACCGAACGG ACGAAGATGA TGAACCAGTT GTTCAAGCTC
GACCAGTATG ACCTGGCTGC CCGAGTGAGC AAACTGAGTA AAGCGAATGA CGACCAACTG
GCCGAACTTC GCGGGTTGTT ATCCCCTCTG GAAGCTGTAA CACCCGAAAC CATTGAGCAG
GCAAAGACCG ACATTACTGT TATTTCTGAG TCTCTGAGCC GGAAGGAAGC CGAAATCAAT
GACTTGTCTC CTGCCGAAAA ACGATTACTC GAAAACCAGC AACGTAGCCA AACACTGGTA
TCGACTCAAC AGGAACTCAC CCAGGTTCTT AACCGGGCAC CCCTCTATCA GCAACGGGAA
CAGGCACTGG CCATTTACGA AACCTGTCTG CTCGTCTTCC AGGCCGACTT TGCTAACCTC
GATAAGCTTA ATTCCCGCAA AACCAGACTG ATAGAACAGG AACAGGCGGC CCAGCGGCAA
CTCCTGTTCG TAACGAAGCG GTTGGTAGGC TTACGTAGTT TATACGAAGC GGCCAAACAG
GCTTACGAAA CGCGCGACGA ACTACAGCAG AAAATTGACG AACTGGATAC GGTACAGCAA
ATCCGAACGC TGCAACAAAC CATCGGCCAG CAAACCCGTA ATCGCGATAC GCTGGCCAGT
CAGCTCCACC ACCAAGCGAC TTTAATTGAA CGGCACAAGG CAACCCGCGC CAAACACCGG
CTCATTCTGG ATAACGGCAT CGGTCGGACG TCCGATCTAG AGCGGCTTTA TAAAGTTAAG
AACTGGTTTA CGGCTTATAA ACCTCTGAAG AAACAAGCCG ATGATCTTCA ACTGGCCGTC
GACAACTATG ACCGGGCGAT TGAAAAACTG AAACAGCAGA AGAACGATGC GCTGTTGGGT
TTTCCACCCG ATTGGACTGA CTTAACGCTC AAAACCTTAC CGGATGCTAT TGAGGAGGCT
CTTGAGAAAT TTAAAGAAGT TCGGGAGGAC CGCGAGGACA AACACCGGAA ACTACTCGTT
CAGGATGAGT TACGAAAATA TGCCGATGCA CTGAATGAAG GACAACCCTG CCCACTTTGC
GGATCAACGC ACCATCCTAA CCGACACAAG GGCGATGAGG AAAGCATTGA TGTAAAAGGG
AGCGAAGCCG GTTTACAGAA AGTAATTCAG CGAATAGAGG TCACCAGTAA GCTACAGCTT
GCCATTAAGG AGCTGACGAC AAAACTGCGG AGCGAACACG ATAACGGCAA ACGGCTCATG
CAGGAGCGTA CCGAAATCGT CCGGCAGTTG ACCGAGCACG AAGATAATTT TATGTGGCCG
GAATTCTCGA AAGAGCAGGA AGGTGAGGTG ATAAATGCCA TCCAAAAAGA GAGCGACGCG
CAGAAGCAAA TCCTGGACGC GCAAAAGGCG ATTCAGGATC TCGAAAAACT TATAGGAGAA
GCCGAAGCGG CCCATAACGA TCTAAACAAA AAAGTGGTCG ACGCGGGTAA TGCCATTGCC
GGATTGAGCG GGCAATTGAA AACAGCGGCC GAATCGCTGG AGCATTTCCG GCTGGAAGAA
GTGAAAAACT GGGGACTTGA CCAGATTGCT GACCTACGCG AATCACTCAC CAAAACCTAC
CGCCAGGCAA AAATTCATTT CGACGATACG GCAAAGCAGC AGGGTGAAGC CGAAAAAGAA
CAGGCAACGG CTGAAGAACA AATTCAGCAA TTCCATAATC AATTGGCCGA AATAGTCGCT
GAACAGGAAG GTCTGGAAGT CACCATCGCG CAGAATCTGG CCAACCAAAA CCTGACCCGC
AAGCAGGTGA AACAGATTCT ACAATCTAAC CTAAATATCG GTCAGGAACG ACAGCAGATC
AACGAATACA ACGAAAAGCG AAGCAGTCTG CAAGGACAAG TCGATACGCT ACAGACTGAG
CTAGCCGAAC AGCCGTTCGA CCCGGTCGAA TTAGCGACGG TTCAACAACA GTTAGCAACC
TTACAGACCG AGAAGGATGC GCTGAACAAA GAACATGGCC GTGCTACCAG TGTGCTAGCT
GCCCTCGAAA GTCAGTGGCA GCAAAAGCTG GAACACCAGA AGCGGCACGA TGAACTTGAC
CTCCGAAAGC AGGACCTGAA GAAGATGGAC GAGATGTTCA GAGCGCAGGG CTTCGTGAAT
TACGTGTCGT CGGTTTATCT GAAAAACCTC TGTGAATCAG CCAATGAACG ATTCTTTAAG
CTGACCAATA ATCAGCTGCG GCTCGAACTG GACGACAAAA ACAATTTCCT CGTGCGCGAC
TTCCTCAACA GCGGGGAGGT ACGGAGTGTA AAAACGCTCT CGGGCGGTCA GACCTTCCAG
GCAGCTCTGT CGCTGGCGCT GGCGTTATCG GATAACATTC AACATCTGAC GAAAGCAAAG
CAAAATCTGT TTTTCCTGGA TGAAGGCTTT GGTACGCTCG ACAAAGATTC CCTGCAAACG
GTCTTCAAAA CGCTGAAAGC CCTCCGCGCC GAAAATCGGG TCGTTGGCAT TATCTCGCAC
GTGGAAGAGC TTCAGCAGGA AGTGGAACAT TTTATTCGGG CAGAATCGAC CGAGAATGGT
AGCCGGATTA TTCGGAGCTG GGAGAGTTGA
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| Protein sequence | MIPIKLSIQG LYSYQDLQEI DFQQLIGSSV FGIFGKVGSG KTSLLEAISF ALYGETERLN
SRDNRQYNMM NLKSKHLIID FQFQAGPEQQ LYKFVYEAKR HPKKHHEIGP GERRMFIRQG
DEWQPIGNEK EDIAVLSKQI LGLDYDNFKR TIIIPQNQFR EFLELSPTER TKMMNQLFKL
DQYDLAARVS KLSKANDDQL AELRGLLSPL EAVTPETIEQ AKTDITVISE SLSRKEAEIN
DLSPAEKRLL ENQQRSQTLV STQQELTQVL NRAPLYQQRE QALAIYETCL LVFQADFANL
DKLNSRKTRL IEQEQAAQRQ LLFVTKRLVG LRSLYEAAKQ AYETRDELQQ KIDELDTVQQ
IRTLQQTIGQ QTRNRDTLAS QLHHQATLIE RHKATRAKHR LILDNGIGRT SDLERLYKVK
NWFTAYKPLK KQADDLQLAV DNYDRAIEKL KQQKNDALLG FPPDWTDLTL KTLPDAIEEA
LEKFKEVRED REDKHRKLLV QDELRKYADA LNEGQPCPLC GSTHHPNRHK GDEESIDVKG
SEAGLQKVIQ RIEVTSKLQL AIKELTTKLR SEHDNGKRLM QERTEIVRQL TEHEDNFMWP
EFSKEQEGEV INAIQKESDA QKQILDAQKA IQDLEKLIGE AEAAHNDLNK KVVDAGNAIA
GLSGQLKTAA ESLEHFRLEE VKNWGLDQIA DLRESLTKTY RQAKIHFDDT AKQQGEAEKE
QATAEEQIQQ FHNQLAEIVA EQEGLEVTIA QNLANQNLTR KQVKQILQSN LNIGQERQQI
NEYNEKRSSL QGQVDTLQTE LAEQPFDPVE LATVQQQLAT LQTEKDALNK EHGRATSVLA
ALESQWQQKL EHQKRHDELD LRKQDLKKMD EMFRAQGFVN YVSSVYLKNL CESANERFFK
LTNNQLRLEL DDKNNFLVRD FLNSGEVRSV KTLSGGQTFQ AALSLALALS DNIQHLTKAK
QNLFFLDEGF GTLDKDSLQT VFKTLKALRA ENRVVGIISH VEELQQEVEH FIRAESTENG
SRIIRSWES
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