Gene Slin_5892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5892 
Symbol 
ID8729670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7134702 
End bp7135517 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content53% 
IMG OID 
ProductEnoyl-(acyl-carrier-protein) reductase (NADH) 
Protein accessionYP_003390654 
Protein GI284040724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.17121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000743337 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTTACG GATTACTGAA CGGAAAACGC GGCATCATTT CCGGTGCCCT GGACGAAAAA 
TCAATCGCCT GGAAGGTCGC TTTGAAAGCG AAGGAAGAAG GTGCTACGTT TACCCTCACC
AACGCGCCCA TTGCGATGCG TATGGGAGCA ATCAAACAAC TCGCTGAGCA GTGCAATGCC
GAAATTATTC CGGCTGACGC GACGTCGGTC GAAGACCTGG AAAATCTGTT CACCAAATCA
ACCGAAGTGC TGGGCGGTAA AGTTGACTTT GTGCTGCACA GCATTGGCAT GAGCCCCAAC
ATCCGTAAGG GTAAAGCCTA TACAGACCTG AATTACGACT GGTTCAAACA AAGCATCGAC
ATCTCGGCCC TGTCGTTCCA CAAAATGATG CAGACGGCCT ATAAATTGGA CGCTATCAGC
GAATGGGGTT CGGTGGTAGC CCTAACCTAC ATGGCAGCTC AGCGGACGTT TCCGTTCTAC
ACGGATATGG CCGATGCAAA AGCGGTACTG GAGTCGATTG CCCGCAGCTT TGGCTACCGC
TATGGTAAGT CGCATAAGGT GCGTGTGAAT ACAATTTCGC AATCGCCAAC GCCAACGACG
GCGGGTGGCG GTATCGGTGG CTTCGATAAG TTCTATGACT TCGCCGACAA AACCGCGCCC
CTGGGCAATG CCACCGCTGA CCAGTGCGCG GACTACTGCA TCACGCTCTT CTCGGACTTG
ACCCGCATGG TGACCATGCA GAACCTGTTC CACGATGGCG GTTTCTCCAT GACTGGTATC
TCGGAAGAAG TTATGGCGTT GGTAACGAAA GAGTAA
 
Protein sequence
MAYGLLNGKR GIISGALDEK SIAWKVALKA KEEGATFTLT NAPIAMRMGA IKQLAEQCNA 
EIIPADATSV EDLENLFTKS TEVLGGKVDF VLHSIGMSPN IRKGKAYTDL NYDWFKQSID
ISALSFHKMM QTAYKLDAIS EWGSVVALTY MAAQRTFPFY TDMADAKAVL ESIARSFGYR
YGKSHKVRVN TISQSPTPTT AGGGIGGFDK FYDFADKTAP LGNATADQCA DYCITLFSDL
TRMVTMQNLF HDGGFSMTGI SEEVMALVTK E