| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5889 |
|---|
| Symbol | |
|---|
| ID | 8729667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7131498 |
|---|
| End bp | 7132010 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | phosphatase KdsC |
|---|
| Protein accession | YP_003390651 |
|---|
| Protein GI | 284040721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.181646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00127434 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAA TCCAGGAGCA ATTCAAGCAA ATAAAAACCT TTATTTTCGA TATAGATGGT
GTATTAACCG ATGGCGGGGT TTCACTGCTC GCATCGGGCG AACGTTATAG AACGGTTTTT
ATCCGGGATA CCTATGCCAT TGAACAGGCT CTGAAAGGCG GCTTTCGGGT AGCCATTATT
TCAGCAGCTA ATGCCGACGG CCTTCGGAGC TGGCTAACAT CCATGAATGT GAAAGACATT
TTCATGGGTG GCCCTTCCGA CCAGAAAGTA AATGCGTTCC TCGGCTACAT CGCCCGCGAT
GGCTTGAACG AATCCGAAAT TCTGTACATG GGCGACGATC TGCCCGATCT TCCGATTTTA
AGCCGATTGG CGGTACTGAG CACCTGCCCG GCAGATGCCG TCGACGAGGT CCAGGCCGTT
TGCCAGTATA TATCGCCTAA AGTGGGAGGC CGTGGTGCCG TTCGGGATGT GATCGAACAG
GTGATGAAGG CGCAGGAAAA ATGGGGTTTA TAA
|
|---|
| Protein sequence | MTAIQEQFKQ IKTFIFDIDG VLTDGGVSLL ASGERYRTVF IRDTYAIEQA LKGGFRVAII
SAANADGLRS WLTSMNVKDI FMGGPSDQKV NAFLGYIARD GLNESEILYM GDDLPDLPIL
SRLAVLSTCP ADAVDEVQAV CQYISPKVGG RGAVRDVIEQ VMKAQEKWGL
|
|---|
| |