Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5884 |
Symbol | |
ID | 8729660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7125862 |
End bp | 7126704 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003390646 |
Protein GI | 284040716 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.139697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0155606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACTCC ATATTATGCG GCTGTGCACG GCAATTTTGA TCGTGATTGT ACTACTATCG GATTATACGG TCGTTGCTCA GCCGTTTCGG CAGCAAAGTC CGATCATCAT CAGCGATGAC CTGGTCTATG TGAAAGTCAA CGTCAATGGC CGGGGCCCCT TTAATTTTAT CCTGGATTCT GGTACGGCCG GTATTGGGCG GATCGATCGT CAACTGGCTA AAGAGATTGG ACTGAAAATT ATTGGTTACC AACAAGTTTC GGATATCTAC CAGTCGAAAA TTGAAATTCT GGTTTCTGTT GAAAGCCTTG GCCTGGGCCA GGTTACACAG TCGGGGCTTA GATTGATGGT TGGTGATTAC AATACCAAAC CCAAACAAAT ACGGATAGAC GGCGTATTGA GCCGGGACTT CTTTTACAAC TACCTGCTTA CTATTGATGG ACCAGCACGT CAACTGATTA TTTCGAAAGA AGGGTTGGAG ATGGGGGCGG AAGGCGTTCT CAGCTATACT AAAGCCTTTC TAATTCCGGG CAAGATCGGG CAAACAGATT TGCTGTTCAA CCTGGATACC GGATCGAACT TATCCCTCCA TTTTCCGGTG GGTAAATTGA CCGGCATTCG CTACGAAAAC ACCCTGAACA AGCGAGAAGA AACGAAAGCC AGTGCAACCT TTACGCTACA GGAAGCGGTA ATAAAAGACG ACCTGGTAGT AGGGTCAGTC CGGATGAAAA ACCAGAAAGT GTATTACTCC GACAAAGCCC ACCAGATCAA TGTAGGGGAG GGCTTTCTGA AAGACCATGT CGTTACGTTC GATCAGCGCA AGAGACTAGT CAGAATAGAC TAA
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Protein sequence | MLLHIMRLCT AILIVIVLLS DYTVVAQPFR QQSPIIISDD LVYVKVNVNG RGPFNFILDS GTAGIGRIDR QLAKEIGLKI IGYQQVSDIY QSKIEILVSV ESLGLGQVTQ SGLRLMVGDY NTKPKQIRID GVLSRDFFYN YLLTIDGPAR QLIISKEGLE MGAEGVLSYT KAFLIPGKIG QTDLLFNLDT GSNLSLHFPV GKLTGIRYEN TLNKREETKA SATFTLQEAV IKDDLVVGSV RMKNQKVYYS DKAHQINVGE GFLKDHVVTF DQRKRLVRID
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