Gene Slin_5884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5884 
Symbol 
ID8729660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7125862 
End bp7126704 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390646 
Protein GI284040716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.139697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0155606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTCC ATATTATGCG GCTGTGCACG GCAATTTTGA TCGTGATTGT ACTACTATCG 
GATTATACGG TCGTTGCTCA GCCGTTTCGG CAGCAAAGTC CGATCATCAT CAGCGATGAC
CTGGTCTATG TGAAAGTCAA CGTCAATGGC CGGGGCCCCT TTAATTTTAT CCTGGATTCT
GGTACGGCCG GTATTGGGCG GATCGATCGT CAACTGGCTA AAGAGATTGG ACTGAAAATT
ATTGGTTACC AACAAGTTTC GGATATCTAC CAGTCGAAAA TTGAAATTCT GGTTTCTGTT
GAAAGCCTTG GCCTGGGCCA GGTTACACAG TCGGGGCTTA GATTGATGGT TGGTGATTAC
AATACCAAAC CCAAACAAAT ACGGATAGAC GGCGTATTGA GCCGGGACTT CTTTTACAAC
TACCTGCTTA CTATTGATGG ACCAGCACGT CAACTGATTA TTTCGAAAGA AGGGTTGGAG
ATGGGGGCGG AAGGCGTTCT CAGCTATACT AAAGCCTTTC TAATTCCGGG CAAGATCGGG
CAAACAGATT TGCTGTTCAA CCTGGATACC GGATCGAACT TATCCCTCCA TTTTCCGGTG
GGTAAATTGA CCGGCATTCG CTACGAAAAC ACCCTGAACA AGCGAGAAGA AACGAAAGCC
AGTGCAACCT TTACGCTACA GGAAGCGGTA ATAAAAGACG ACCTGGTAGT AGGGTCAGTC
CGGATGAAAA ACCAGAAAGT GTATTACTCC GACAAAGCCC ACCAGATCAA TGTAGGGGAG
GGCTTTCTGA AAGACCATGT CGTTACGTTC GATCAGCGCA AGAGACTAGT CAGAATAGAC
TAA
 
Protein sequence
MLLHIMRLCT AILIVIVLLS DYTVVAQPFR QQSPIIISDD LVYVKVNVNG RGPFNFILDS 
GTAGIGRIDR QLAKEIGLKI IGYQQVSDIY QSKIEILVSV ESLGLGQVTQ SGLRLMVGDY
NTKPKQIRID GVLSRDFFYN YLLTIDGPAR QLIISKEGLE MGAEGVLSYT KAFLIPGKIG
QTDLLFNLDT GSNLSLHFPV GKLTGIRYEN TLNKREETKA SATFTLQEAV IKDDLVVGSV
RMKNQKVYYS DKAHQINVGE GFLKDHVVTF DQRKRLVRID