Gene Slin_5876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5876 
Symbol 
ID8729652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7118798 
End bp7119535 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID 
Productlipoate-protein ligase B 
Protein accessionYP_003390639 
Protein GI284040709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.615379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGGG TTATTAATAA ACAAGTTGAC GTCCGTAAAT TAGGCTCAAT CGCGTATCAG 
GAAGCCTGGG ATGAACAGGA GCGTCTGTTC AGCACTATCG TTGATCAGAA ACTGGCGAAC
CGCACCGGCT CGCCGGATGA GCAGCAGCCA ACTGCCAATT ACCTGCTGTT TTGTGAACAT
CCGCACGTGT ATACCATCGG TACAAGTGGG CACGAAGAAA ACCTTCTGGT CGATGAGAAC
CGGCTCGCTT CGGAGTTTGG GGCATCGCTT TTCAAAATTC GGCGCGGGGG CGATATTACT
TACCACGGCC CCGGCCAGCT GGTAGGCTAT CCAATTCTGG ACCTGGATAA TTTTTTTACC
GACATTCATC GGTATATGCG GCTGCTGGAA GAAAGTATTA TTCTTACACT GGCCGATTAC
GGTTTGCAGG CGGGCCGCAT TGAGGGCGTT GGGGCCGAAC GGCTCACCGG TGTGTGGCTC
GATGTGGATG GGAACAACCC TCGCAAAATC TGTGCATTAG GCGTTAAAGC AAGCCGTTGG
GTAACGATGC ACGGTTTCGC CTTGAACGTT AACACAGATT TGAGTTATTT TAACCATATT
GTCCCCTGCG GCATCACCGA CAAAGCCGTC ACCTCACTGG CGCTTGAGTT GGGTCATGAG
GTGCCACTGG ACGAGGTGTC AGATAAAGTA CAACGGCATC TGTTTACGCT GTTTGACATG
GAACCGGTTA ATTCATAA
 
Protein sequence
MNRVINKQVD VRKLGSIAYQ EAWDEQERLF STIVDQKLAN RTGSPDEQQP TANYLLFCEH 
PHVYTIGTSG HEENLLVDEN RLASEFGASL FKIRRGGDIT YHGPGQLVGY PILDLDNFFT
DIHRYMRLLE ESIILTLADY GLQAGRIEGV GAERLTGVWL DVDGNNPRKI CALGVKASRW
VTMHGFALNV NTDLSYFNHI VPCGITDKAV TSLALELGHE VPLDEVSDKV QRHLFTLFDM
EPVNS