| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5873 |
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| Symbol | |
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| ID | 8729649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7114839 |
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| End bp | 7117316 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | ribonuclease R |
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| Protein accession | YP_003390636 |
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| Protein GI | 284040706 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACG GAAAATCGAA ACAAACTAAA TATACAAAGG ATGCTGCCAG CCAACCGGCC
GGCAGGCAAT CCCACACAGC ACGCCCACGC GAAAAAGGGG TGGAACGATC CGGCAAAAGC
CACGTTCGCC CCATTCAGCA GGCAGACTCC TTTCTGGATG AGATGAAGAA CGACATTATG
GCGTTTTTTC AGATTAACGA CGAACAATCG TTTACCCAAG AGCAGGTTCT TGACCATTTC
GACACCAGCG ACCGACGCAT GAAACTCATC ATGCACGGCC TGATCGGCGA ACTAACCGAC
GAAGGTACTA TTGTACGCCA GCCCGACGGC ACTTACCGCG CCGATGCCGA CGCCAACGTT
GTTGAAGGCG TGGTCGACCA TGTTAACTCA CGCTTTGCTT TTGTTATTCC CGATACAGCC
GCTGGCACCG CCCGCGACCG CGACGACGAC ATCTGGGTAT CGACGGACGA TCTGGCCGGA
GCCGTCGATG GAGACCGCGT ACGCGTGGTA CGTTTTCAGG ATTCGCGCAA CGGTGGCCGC
AATGCCGCCC GACGCCGGAT TGAAGGCAAA GTGGCCAGCG TAGTAGAGCG GGGCCGTACA
GAACTGGTGG GCCGCATTGA AGTCTGGCCA ACCTACGGTT TTGTGGTGCC CGACAGCAAG
AAAATATACG ATGACATTTT CATCCCGAAA GAGAAACTCG GGGGTGCCAA CGACGGCGAA
AAAGTTATTG TTCGCCTGAC GAAATTTCCC GACCCCAACA GCAGCAAACA GCGGTTTGAG
GGTGAGGTGA TAACGGTACT GGGTGTGGCT GGTCAGAACA ACACCGAAAT GCACGCTATT
CTGGCAGAGT TCGGTTTGCC GATTCACTTC CCCGCCGATG TGGAGAAAGA GGCCGAAGCC
ATCCCGACTA AAATTCTGAA AAAGGATTTG GCCAAACGGC GCGACATGCG CGATGTGACG
ACCTTCACCA TCGACCCAAT TGACGCCAAG GATTTTGACG ATGCCCTGTC GGTACAAATA
CTCGACAACG GCAATTTTGA AATTGGTATT CACATTGCCG ATGTCACCCA CTACGTGCTG
CCCGGCTCGA AACTGGAAGA AGAAGCGTTC AAGCGGGCCA CCTCGGTTTA CCTCGTAGAT
CGGGTAGTGC CTATGCTTCC CGAAAAATTG TCGAACGGCC TGTGTTCACT CCGGCCCAAT
GAAGACAAGC TGACTTTCTC GGCTGTTTTC GAAATGACGT CCGATGCCAA AATCGTGAAC
GAATGGTTTG GCCGGACGGC TATTCACTCC AACCGCCGGT TCGCCTACGA AGAAGCGCAG
GATATCCTGA ACAGCAACAG TGGTGACTAC ATTGAGGAAC TACGCCTGCT GAACGAGTTG
GCGTATAAAC TCCGCGACGA ACGCTTCAAG AACGGAGCCA TCAATTTCGA AACGGTTGAA
GTGCGCTTCC GGCTCGACGA GAATGGCGTT CCACTGGCCG TTTACCCGAA AATTCGGCAG
GACACCAACA AACTCATCGA AGAGTTTATG TTGCTGGCTA ACAAACGGGT AGCCGAGTTT
GTCCATTCCC TCTCGAAGCG CAACAAGGGC GGTGAAGAAA ACACAATGGT TTACCGGGTG
CACGAATCGC CCGCCGAAGA TAAACTGCGT AGTTTTTCGG ATTTTGCGCG TAAACTGGGC
TACAAACTCA ACGTCGACGA CGAGCACCTG TCCAACTCGA TGAACCGCTT TATGGCGAGC
ATCGAAGGCA AACCCGAAGC CAACATGCTC CAGCAGCTGG CCGTTCGGAC TATGTCGAAG
GCGCGCTACA GCACCGAAGA CCTTGGGCAC TTCGGACTGG CCTTTAAACG GTATTCGCAC
TTCACCTCGC CCATTCGTCG TTACCCCGAT ATGATGGCGC ACCGCTTGTT GCAGCATTAC
CTGGACAAGG GTAAACCCGC CGACCGTGAC GAATACGAAG AGAAGTGTCG GCATTCGTCG
GAACGGGAGA AAATGGCTTC CGATGCCGAA CGTGCCAGCA TAAAGTACAA GCAGGTTGAA
TTTATGAGCC GGATGGCTCC CGATCAGGTA TTTGAGGGTG TTATTTCGGG CGTTACGGAG
TTCGGCATCT TCGTTGAAAT CACCGAGAAC AGCTGCGAAG GCCTGGTTCG TATGCAGGAT
TTGAGCGACG ATTTCTACGA GTTCGACAAA GACAACTACC GCATCATTGG CAGCCGCACC
AAAAAGATGT ACACGTTTGG TGATGCCGTA GTGGTACGGG TGAAAGAAAC CAACCTCGCC
CGCCGAAGCA TGGACTTCGC GCTTGTCAGC GATAAAGCAG GTCGGGCTAC CGATGCGGGA
TCGGGCCGTA AGTCGGGCCG CAGCGACAGC AGTCGTTTGG GCGGTTCGTC TTCTACCCGC
AAAGTAGGCG GCAGCCGTGG CAAAGAAAGC GTAGCTGCGA AAGGTGAAAA CCGCCGTGGC
GGACGCGGTC GCCGATAG
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| Protein sequence | MRNGKSKQTK YTKDAASQPA GRQSHTARPR EKGVERSGKS HVRPIQQADS FLDEMKNDIM
AFFQINDEQS FTQEQVLDHF DTSDRRMKLI MHGLIGELTD EGTIVRQPDG TYRADADANV
VEGVVDHVNS RFAFVIPDTA AGTARDRDDD IWVSTDDLAG AVDGDRVRVV RFQDSRNGGR
NAARRRIEGK VASVVERGRT ELVGRIEVWP TYGFVVPDSK KIYDDIFIPK EKLGGANDGE
KVIVRLTKFP DPNSSKQRFE GEVITVLGVA GQNNTEMHAI LAEFGLPIHF PADVEKEAEA
IPTKILKKDL AKRRDMRDVT TFTIDPIDAK DFDDALSVQI LDNGNFEIGI HIADVTHYVL
PGSKLEEEAF KRATSVYLVD RVVPMLPEKL SNGLCSLRPN EDKLTFSAVF EMTSDAKIVN
EWFGRTAIHS NRRFAYEEAQ DILNSNSGDY IEELRLLNEL AYKLRDERFK NGAINFETVE
VRFRLDENGV PLAVYPKIRQ DTNKLIEEFM LLANKRVAEF VHSLSKRNKG GEENTMVYRV
HESPAEDKLR SFSDFARKLG YKLNVDDEHL SNSMNRFMAS IEGKPEANML QQLAVRTMSK
ARYSTEDLGH FGLAFKRYSH FTSPIRRYPD MMAHRLLQHY LDKGKPADRD EYEEKCRHSS
EREKMASDAE RASIKYKQVE FMSRMAPDQV FEGVISGVTE FGIFVEITEN SCEGLVRMQD
LSDDFYEFDK DNYRIIGSRT KKMYTFGDAV VVRVKETNLA RRSMDFALVS DKAGRATDAG
SGRKSGRSDS SRLGGSSSTR KVGGSRGKES VAAKGENRRG GRGRR
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