Gene Slin_5861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5861 
Symbol 
ID8729636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7105888 
End bp7106424 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content37% 
IMG OID 
ProductHIRAN protein 
Protein accessionYP_003390624 
Protein GI284040694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.447578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA TAGTTTTACT CCTTGTTGGA GTGTTTGCCT ACCTTATAAT TAGGGCTAAT 
AATAGGAAAA GTAACAAGGC GTTGGATACA GGGTCAAATA CAAACTATGA CCTAGAGAGT
AAGTTAGATA ACAACACCTC TCAACCAACC GATATAGAAA CAAACTTATC AACGGTTAAG
GAAATTAGCA GTAAAACCAA GAAAAAGAAA GAGTGGAAAA GGTTCAGGAC TAAAATAGCT
GGGCTTAAAC ACTATGACGC TTCTATAATA GTAAAGTCGT TAACAGTCGG AACACAACTG
ATTCTAAAAC GAGACCCTAG TAACTCCTAT GACGCTAACG CGGTTAAAAT TTTTTATGGC
AAATACCTTT TAGGCCATGT TCCAGCAATA GATTCGGAGA TTGTAGCAAA AGTTATGGAT
ACAGGCGAAG AAGTTAGTGC TGAAATAGCA AGAGCCTATG TAAGTCCTTA TGACCACCCT
GAACACGGGC ATTTTATGGA AATTAGCGTT TATATAGTTA GACCATTAAC TGAATAG
 
Protein sequence
MEIIVLLLVG VFAYLIIRAN NRKSNKALDT GSNTNYDLES KLDNNTSQPT DIETNLSTVK 
EISSKTKKKK EWKRFRTKIA GLKHYDASII VKSLTVGTQL ILKRDPSNSY DANAVKIFYG
KYLLGHVPAI DSEIVAKVMD TGEEVSAEIA RAYVSPYDHP EHGHFMEISV YIVRPLTE