Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5859 |
Symbol | |
ID | 8729634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7100675 |
End bp | 7102378 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003390622 |
Protein GI | 284040692 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCG AGTCAACACT AAATCCATAT CCCTGGCGCC GTTTCTACCC CAAAGAGGTG CCGGACGAGA TAAACCCGGA TGCTTATCCA TCGCTGGCAG CTTTGATGGA AGAGGGTTTT CGACAATTCA CGGACCGGCC TGCTTATTCC TGCATGGGAA AAGAAATCAC CTTTGGTGAG GTCGACAAGC TTTCAGCGCA GTTTGCCTCC TTTTTGCAAA ACGAACTGAA ACTTCAGAAA GGGGATCGCA TAGCGATTCA GATGCCTAAC ACGCTGCAGT ATCCGGTGGC TATGTTTGGC GCCTTGCGCG CGGGTTTGGC CGTTGTGAAC ACAAACCCGC TGTACACACC ACGTGAGATG CAGCATCAGT TCAAGGACTC CGGGGCAAAA GCCATCGTGA TCCTGGCCAA CTTTGCCAGC AATCTGGAGA AAATTCTAGA TCGAACGGAC ATACAGCATG TCATTGTCAC CTCGCTCGGT GATTTACTGG GTTTCCCCAA AAAGCAGATC GTCAATGCGG TTGTTAAGTA TGTGAAAAAG CTGGTTCCGG CTTACAACCT TCCCAACTCG ATTTCGTTCA ATGATGCCCT GAGCCGGGGC AGCAGCCAGC CTTTCAAACC CGTAGCCATC AAGAATACGG ACATGGCTTT CGTTCAATAT ACGGGCGGCA CCACGGGCGT TTCGAAGGGC GCTGTACTGA CGCACCGCAA CATCCTGTCC AATGTTGAAG GCCAGGATTA CTGGATGAAG CCGGGTGGCA TTCCCGATGG AGAAGGCATT ATCGTAGCGG CTTTGCCACT CTACCACGTG TATGCACTTA CGACCAACGC ACTGGCGGCA TTGAAAAGCG GGTCTATGAA CCTGATGATT ACTAATCCGC GCGACATGAA CGCCTTTATC GACGATCTGA AAAAATACAA GATCACTGCT TTTACGGGCG TCAACACGCT TTATAATGGC CTGTTGAATA ACCCCCGAAT TGGCGAAGTT GACTTCAGTC ACCTTAAAAT CACATCGGCG GGTGGTATGG CCCTGCAAAC ATCCGTTGCC GAACGATGGG CGAAACTGAC CGGAAATACC CCCTGCGAAG GCTACGGCCT GACGGAGACA TCGCCGGTAC TTTGTTCCAA CCCTACCGAT GGCAATGCAC GGGTAGGCAC GATTGGCATC CCCTGGCCGA GTACAGAAAT GAAGATCATC CGCGACGATG GCAGCGATGC CCCCGTTGGC GAACCCGGCG AAATTGTAGC TCGTGGTCCG CAGGTGTTCA GCGGGTATTA CAACCGGCCC GAAGAAACCG CCAAATCCAT GCTGGGTGAC TGGTTTAAAA CCGGCGATGT GGGTGTTATG AATGAGGAAG GCTTCTTTAA GATTGTCGAC CGCAAGAAAG ACATGATCCT GGTGTCCGGC TTTAACGTTT ACCCGAATGA GATAGAAGAT GTGGTGGCCC AGTGTCCGGG TGTGCTCGAA GTGGCGTGTA TTGGCGTTCC CGACGAGAAA TCGACGGAGG TTGTCAAAAT CTTTGTTGTA AAGAAAGACC CGGCGCTTGA GGCTGACACG ATCAAGGCAT TTTGCCGTGA GAACCTGACA CCCTATAAAG TACCCCGCAT TATTGAGTTC AGAACGGAAT TACCCAAGTC GAACGTTGGC AAAATCCTTC GCAAACCTCT ACGAGATGAA GAGTTAGCCA AATTAAAAAA GTAG
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Protein sequence | MNTESTLNPY PWRRFYPKEV PDEINPDAYP SLAALMEEGF RQFTDRPAYS CMGKEITFGE VDKLSAQFAS FLQNELKLQK GDRIAIQMPN TLQYPVAMFG ALRAGLAVVN TNPLYTPREM QHQFKDSGAK AIVILANFAS NLEKILDRTD IQHVIVTSLG DLLGFPKKQI VNAVVKYVKK LVPAYNLPNS ISFNDALSRG SSQPFKPVAI KNTDMAFVQY TGGTTGVSKG AVLTHRNILS NVEGQDYWMK PGGIPDGEGI IVAALPLYHV YALTTNALAA LKSGSMNLMI TNPRDMNAFI DDLKKYKITA FTGVNTLYNG LLNNPRIGEV DFSHLKITSA GGMALQTSVA ERWAKLTGNT PCEGYGLTET SPVLCSNPTD GNARVGTIGI PWPSTEMKII RDDGSDAPVG EPGEIVARGP QVFSGYYNRP EETAKSMLGD WFKTGDVGVM NEEGFFKIVD RKKDMILVSG FNVYPNEIED VVAQCPGVLE VACIGVPDEK STEVVKIFVV KKDPALEADT IKAFCRENLT PYKVPRIIEF RTELPKSNVG KILRKPLRDE ELAKLKK
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