Gene Slin_5848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5848 
Symbol 
ID8729623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7086924 
End bp7087358 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF477 
Protein accessionYP_003390612 
Protein GI284040682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.638132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA ATCCCTTCAC CCAGGACGAA CAACAGCGCA TTGTGGAAGC CATCCGGCAA 
GCCGAAAAGG CTACGTCGGG TGAAATCCGG GTGCATGTAG AGCCACACTG CGCCCACGCC
GACCCCATAC AGCGGGCCAT TGAAGTGTTT GCGCAATTGG GGATGCACCA GACAAAAGAA
CAGAATGGGG TGCTCTTTTA TCTGGCATAT ACCGACCGCA AGTTTGCCAT TTTAGGCGAC
AAGGGAATTG ACGCCAAAGT ACCCGACAAT TTTTGGGAAA GTACAAAAGA GCTGCTTCGG
AGCTACTTTA AATCAAGTCA ATATGCCGAA GGGTTAAGTC TTGGTATTGA GCGGGCCGGG
CAACAATTGA AACAGTACTT TCCCTACGCC AGCGACGACG TTAACGAACT CGCCGACGAT
ATTTCGTTTG ACTGA
 
Protein sequence
MQNNPFTQDE QQRIVEAIRQ AEKATSGEIR VHVEPHCAHA DPIQRAIEVF AQLGMHQTKE 
QNGVLFYLAY TDRKFAILGD KGIDAKVPDN FWESTKELLR SYFKSSQYAE GLSLGIERAG
QQLKQYFPYA SDDVNELADD ISFD