Gene Slin_5847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5847 
Symbol 
ID8729622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7086249 
End bp7086830 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content49% 
IMG OID 
ProductLemA family protein 
Protein accessionYP_003390611 
Protein GI284040681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.871032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA CATTAATTAT TGTGGTGGTT CTTGCCCTTA TACTGGGCAT GTACGGCTGT 
AGCTCTTATA ACGGTTTAGT TCAGTCAGAC ACGAACGTGC AGGAAAAATG GGCGCAGGTG
CAGACCCAGT ACCAACGCCG GGCCGATTTA ATTCCCAACC TCGTTCGGAC AGTACAAGGC
GCTGCTAATT TTGAAAAAAG TACGCTGACG GCTGTTATTC AGGCCCGCGC CAGTGCTACT
CAGGTGAAAT TTACGGCGGA TCAGTTGACG CCTGAGAACG TCCAGAAGTT TCAGGCAGCT
CAGGATCAAT TAAGTGGCTC ACTGTCGCGT TTGCTGGCGG TGGCCGAAAG TTATCCTAAC
CTGAAAGCCA ATCAGAACTT CTCGGAGTTA CAGGCTCAGC TGGAGGGAAC AGAAAATAGA
ATTGCTGTGT CGCGGAATGA TTTTAACGGA GCCGTGAAGA CCTATAACCA GTCGGTTCGG
TCATTTCCGA ATAATATCTT CGCCGGTATT TTTGGTTTCC CGGTTAAAGG CTTCTTCGAA
GCATCGCAAG CTGCCCAAAG CGCCCCAACG GTACAGTTTT AA
 
Protein sequence
MSKTLIIVVV LALILGMYGC SSYNGLVQSD TNVQEKWAQV QTQYQRRADL IPNLVRTVQG 
AANFEKSTLT AVIQARASAT QVKFTADQLT PENVQKFQAA QDQLSGSLSR LLAVAESYPN
LKANQNFSEL QAQLEGTENR IAVSRNDFNG AVKTYNQSVR SFPNNIFAGI FGFPVKGFFE
ASQAAQSAPT VQF