Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5847 |
Symbol | |
ID | 8729622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7086249 |
End bp | 7086830 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | LemA family protein |
Protein accession | YP_003390611 |
Protein GI | 284040681 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.871032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAAGA CATTAATTAT TGTGGTGGTT CTTGCCCTTA TACTGGGCAT GTACGGCTGT AGCTCTTATA ACGGTTTAGT TCAGTCAGAC ACGAACGTGC AGGAAAAATG GGCGCAGGTG CAGACCCAGT ACCAACGCCG GGCCGATTTA ATTCCCAACC TCGTTCGGAC AGTACAAGGC GCTGCTAATT TTGAAAAAAG TACGCTGACG GCTGTTATTC AGGCCCGCGC CAGTGCTACT CAGGTGAAAT TTACGGCGGA TCAGTTGACG CCTGAGAACG TCCAGAAGTT TCAGGCAGCT CAGGATCAAT TAAGTGGCTC ACTGTCGCGT TTGCTGGCGG TGGCCGAAAG TTATCCTAAC CTGAAAGCCA ATCAGAACTT CTCGGAGTTA CAGGCTCAGC TGGAGGGAAC AGAAAATAGA ATTGCTGTGT CGCGGAATGA TTTTAACGGA GCCGTGAAGA CCTATAACCA GTCGGTTCGG TCATTTCCGA ATAATATCTT CGCCGGTATT TTTGGTTTCC CGGTTAAAGG CTTCTTCGAA GCATCGCAAG CTGCCCAAAG CGCCCCAACG GTACAGTTTT AA
|
Protein sequence | MSKTLIIVVV LALILGMYGC SSYNGLVQSD TNVQEKWAQV QTQYQRRADL IPNLVRTVQG AANFEKSTLT AVIQARASAT QVKFTADQLT PENVQKFQAA QDQLSGSLSR LLAVAESYPN LKANQNFSEL QAQLEGTENR IAVSRNDFNG AVKTYNQSVR SFPNNIFAGI FGFPVKGFFE ASQAAQSAPT VQF
|
| |