Gene Slin_5838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5838 
Symbol 
ID8729613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7077888 
End bp7078763 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390602 
Protein GI284040672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.794515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA ACGAATTGAA AGCCCTTATC TCGCTTCTGG ACGACGAAGA CCGGGAAGTC 
GTTGAACACG TTGAACAACA AATTCGACAG ATGGGGGGGC AAATGATACC ATTTTTGGAG
TCAGAATGGG AAGGTAGCTT CAATCCTGCC CTTCAAAAAC GAATAGAAGA AATTATACAC
GATCTCCAAT ATGAGTCTGT ATTGGATCGT ATGCGCGACT GGAAAAATGG CGGAGGTATG
GATTTGCTGG AAGGACTCTG GATCATTGCC ACCTATCAGT ATCCTGACTT GTCGCTCGAT
AAACTCAAGC AGGAGGTAGA GCAACTTTTC TATGATGTAT GGGTTGATTT CAAGGCAGAT
ATGCACCCCG ACGAGCAGAT CAAGGCCATG AATAGTGCTT TTTTTTCGAA GCTAAAATTT
GCGCCGAACA CCAAGCATTT TCACTCGCCG GCCAATTCCA TGATCAACCA GGTACTCGAA
TCGCGCCGGG GAAACCCCAT AACGCTTTGT GTACTTTATA TGCTTATTGC CAAACGGCTC
AATCTGCCTG TATACGGTGT GAATCTGCCC AATCTCTTCG TGCTGACCTA TAAAAACAGC
AGTGGCGTTC AATTTTATAT CAATGTATTT AACCGGGGTC TGGTCTTTAC CACCAAAGAC
ATCGATCAGT ACATTGATCA GTTAAACATC AAACGGCTGG ATACTTTTTA CCAGCCATGC
ACAAACGCCG ATATTGTCCG GCGTGTACTA CGCAATCTGA CGCTGGCTTT TGAGAAAAAT
GGCGATGCCG AACGTGTTCG GGAAGTAGAG CAGATACTCA ATACCGTTCG GGACGACGGC
GATGGCCTCC CTTTGTCCGA TTATACACAA CGGTAA
 
Protein sequence
MNDNELKALI SLLDDEDREV VEHVEQQIRQ MGGQMIPFLE SEWEGSFNPA LQKRIEEIIH 
DLQYESVLDR MRDWKNGGGM DLLEGLWIIA TYQYPDLSLD KLKQEVEQLF YDVWVDFKAD
MHPDEQIKAM NSAFFSKLKF APNTKHFHSP ANSMINQVLE SRRGNPITLC VLYMLIAKRL
NLPVYGVNLP NLFVLTYKNS SGVQFYINVF NRGLVFTTKD IDQYIDQLNI KRLDTFYQPC
TNADIVRRVL RNLTLAFEKN GDAERVREVE QILNTVRDDG DGLPLSDYTQ R