| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5829 |
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| Symbol | |
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| ID | 8729604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7070086 |
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| End bp | 7071462 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | cystathionine beta-synthase |
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| Protein accession | YP_003390593 |
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| Protein GI | 284040663 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.454339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACT ATAATTCTAT CATCGACACC ATCGGCAACA CGCCCCTGGT GAAGCTTAAT
AAAGTCACGA AAGGGATTCG GGGAACGATA CTGGCAAAGG TCGAATACTT CAACCCCGGC
AACTCGGTGA AAGACCGCAT CGCCATACGG ATGATCGAAG ACGCCGAAGC GCGGGGCGTA
CTTAAACCCG GTGGCACCAT CATCGAGGGT ACCAGTGGCA ACACCGGTAT GGGCCTGGCA
CTGGCGGCTA TCGGCAAAGG CTATAAATGC ATTTTTACGA TGGCCGACAA GCAGTCACAG
GAGAAGATCG ACATTTTGCG GGCGGTGGGC GCTGAGGTAG TCGTTTGCCC CACGAACGTC
GCCCCCGATG ACCCGCGCTC GTATTATTCC GTTGCTAAAA AACTGAACCG CGACATTCCC
AATTCGCTCT ACCCAAACCA GTACGATAAC CTCGCCAACA CAGCCGCGCA TTACGAGACC
ACCGGCCCCG AAATCTGGCG CGATACCGAT GGGAAAATCA CGCACTTTGC CGCCGGGGTC
GGTACGGGTG GGACCATTTG CGGTACCTCA AAATTCCTGA AAGAACAAAA CCCGAACCTG
ATTTCGCTGG GACTGGATAC GTACGGGTCG GTATTCAAAA AATACAAAGA AACCGGCCAG
TTCGACGAGG GCGAGATTTA CCCCTACCTG ACCGAAGGTA TTGGCGAAGA TATTCTCCCG
CAGAATGTGG ACTTCAGCGT GATCGACTTT TTCGAGAAAG TGACCGATAA GGACGCGGCC
ATCATGACCC GTCGATTAGC TCGTGAAGAG GGGTTATTTG TCGGCTGGTC GTGCGGTACG
GCTGTGCACG GTGCGCTGGA ATGGGCCAAA CAGCATCTTA CCGACGACGA TGTAATGGTG
ATTTTGCTAC CCGACCACGG CACGCGCTAC TTGGCCAAAA TTTACAACGA TACCTGGATG
AAAGACCACG GCTTTCTGGA AGACCGTGCT TTCAAAACCG CCCGCGACAT CGTTCACAAC
AAAAGCGGTC AGTCGCAGTT AACGACCATT GGCGTAGGCG TGTCGGTGAG CCAGGCAATT
CAGATATTGA ACCGCTACGG GATTTCACAG ATTCCGGTAA CGGACGAGAA TGGCCACATT
GTCGGTAGCC TGACCGACTC GACGGTACTG AACCGGCTCA TTGACGACCC CGCTGTGAAA
GATCATCCGG TAAGTGAAGT GATGGACAAG CCGTTCAAAT TTGTGGGGCT GGACAACACT
ATCGACGCCC TATCGTCGCT GATTGATCGG GATAACAAAG CGTTACTGGT CCGCGACGAG
CGTGAACAGG TGCACATTAT CACGCAAGCC GATTTGCTGG CAGCCATGAC GAGTTAA
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| Protein sequence | MNYYNSIIDT IGNTPLVKLN KVTKGIRGTI LAKVEYFNPG NSVKDRIAIR MIEDAEARGV
LKPGGTIIEG TSGNTGMGLA LAAIGKGYKC IFTMADKQSQ EKIDILRAVG AEVVVCPTNV
APDDPRSYYS VAKKLNRDIP NSLYPNQYDN LANTAAHYET TGPEIWRDTD GKITHFAAGV
GTGGTICGTS KFLKEQNPNL ISLGLDTYGS VFKKYKETGQ FDEGEIYPYL TEGIGEDILP
QNVDFSVIDF FEKVTDKDAA IMTRRLAREE GLFVGWSCGT AVHGALEWAK QHLTDDDVMV
ILLPDHGTRY LAKIYNDTWM KDHGFLEDRA FKTARDIVHN KSGQSQLTTI GVGVSVSQAI
QILNRYGISQ IPVTDENGHI VGSLTDSTVL NRLIDDPAVK DHPVSEVMDK PFKFVGLDNT
IDALSSLIDR DNKALLVRDE REQVHIITQA DLLAAMTS
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