Gene Slin_5823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5823 
Symbol 
ID8729598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7065520 
End bp7065927 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content49% 
IMG OID 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_003390587 
Protein GI284040657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.609352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACCA ACGTCGAACA CATCGGTATT GCCGTCCGCG ATCTCGCGGC ATCGAATGAG 
TTATTTGCCA AACTGCTGAA CGTACAGCCT TACAAAGCCG AAACGGTAGC ATCGGAAGGG
GTCTCTACGT CGTTTTTTAA GGTAAATCAG ACCAAGATCG AACTGCTCGA AGCGACCAAC
CCCGATAGCC CCATCGCTAA GTTTCTGGAG AAAAAAGGGG AAGGAGTCCA CCACATTGCC
TTTGAAGTAG AGGATATCCA AAGCGAGATC GAGCGGTTGA AATCGGAAGG ATTCACGGTA
TTGAACGAGG TACCTAAGCG CGGGGCCGAC AATAAACTAG TTTGTTTCCT GCATCCTAAA
GGCACAAACG GCGTTTTGGT CGAACTTTGC CAGGACATAA AGGAATAA
 
Protein sequence
MLTNVEHIGI AVRDLAASNE LFAKLLNVQP YKAETVASEG VSTSFFKVNQ TKIELLEATN 
PDSPIAKFLE KKGEGVHHIA FEVEDIQSEI ERLKSEGFTV LNEVPKRGAD NKLVCFLHPK
GTNGVLVELC QDIKE