Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5815 |
Symbol | |
ID | 8729590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7059097 |
End bp | 7059771 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | nicotinamide mononucleotide transporter PnuC |
Protein accession | YP_003390579 |
Protein GI | 284040649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.813423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATT TTTTCGACAT CCATACCATC TTCTTTACGC TATGGGACTA CCCCATGAGT TACCTCGAAT TTTCCGGGGC CTTGTCGGGA GCGGTGGCCA CCTGGCTCGC GGCTAAAGCC AACGTATGGA GCTGGCCCAT TGGCGCGGCC AGTGTGCTGT TGTTCTTCTT TCTGTTTTAT CAGATTCAGC TTTACCCCGA CATGTTTTTA CAGGTGTTCT TCTTCATTAC GAACCTGCAG GGCTGGTGGC GCTGGACGCA CCCCAAAGCC CAGGAAGCCG ACAGCCGAAA TGAACTCCGC ATTACCCGAT TACTTGGCAA ACCACTTATT CTGGTGCTTC TCGGTGGGCT TGTAGCAACG GGTATATTAG GCACCTTCGC GCAGAATCTT CACATCTGGT TTCCAGTGCT GTTCAGCCAG CCGAGCGCGT TCCCCTATCT GGATTCGTTC ACTACAGTCA TGAGTATCAT CGGCACATTT ATGATGATTC ACAAAAAGCT GGAATGCTGG TGGGTGTGGC TGCTTGTCGA CATCATCAGC ACCTACATGT ATTTTACGAA GGGCGTAAAA CTGGTGGGTG TTGAGTACGC TGTTTTCTGC CTGATCGCCT TTCAGGGAGC CTGGCACTGG TGGCGTGAAT ACCGAACCTA TCCGGCACAG CAGACACTGC CTTAA
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Protein sequence | MADFFDIHTI FFTLWDYPMS YLEFSGALSG AVATWLAAKA NVWSWPIGAA SVLLFFFLFY QIQLYPDMFL QVFFFITNLQ GWWRWTHPKA QEADSRNELR ITRLLGKPLI LVLLGGLVAT GILGTFAQNL HIWFPVLFSQ PSAFPYLDSF TTVMSIIGTF MMIHKKLECW WVWLLVDIIS TYMYFTKGVK LVGVEYAVFC LIAFQGAWHW WREYRTYPAQ QTLP
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