Gene Slin_5815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5815 
Symbol 
ID8729590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7059097 
End bp7059771 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID 
Productnicotinamide mononucleotide transporter PnuC 
Protein accessionYP_003390579 
Protein GI284040649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.813423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT TTTTCGACAT CCATACCATC TTCTTTACGC TATGGGACTA CCCCATGAGT 
TACCTCGAAT TTTCCGGGGC CTTGTCGGGA GCGGTGGCCA CCTGGCTCGC GGCTAAAGCC
AACGTATGGA GCTGGCCCAT TGGCGCGGCC AGTGTGCTGT TGTTCTTCTT TCTGTTTTAT
CAGATTCAGC TTTACCCCGA CATGTTTTTA CAGGTGTTCT TCTTCATTAC GAACCTGCAG
GGCTGGTGGC GCTGGACGCA CCCCAAAGCC CAGGAAGCCG ACAGCCGAAA TGAACTCCGC
ATTACCCGAT TACTTGGCAA ACCACTTATT CTGGTGCTTC TCGGTGGGCT TGTAGCAACG
GGTATATTAG GCACCTTCGC GCAGAATCTT CACATCTGGT TTCCAGTGCT GTTCAGCCAG
CCGAGCGCGT TCCCCTATCT GGATTCGTTC ACTACAGTCA TGAGTATCAT CGGCACATTT
ATGATGATTC ACAAAAAGCT GGAATGCTGG TGGGTGTGGC TGCTTGTCGA CATCATCAGC
ACCTACATGT ATTTTACGAA GGGCGTAAAA CTGGTGGGTG TTGAGTACGC TGTTTTCTGC
CTGATCGCCT TTCAGGGAGC CTGGCACTGG TGGCGTGAAT ACCGAACCTA TCCGGCACAG
CAGACACTGC CTTAA
 
Protein sequence
MADFFDIHTI FFTLWDYPMS YLEFSGALSG AVATWLAAKA NVWSWPIGAA SVLLFFFLFY 
QIQLYPDMFL QVFFFITNLQ GWWRWTHPKA QEADSRNELR ITRLLGKPLI LVLLGGLVAT
GILGTFAQNL HIWFPVLFSQ PSAFPYLDSF TTVMSIIGTF MMIHKKLECW WVWLLVDIIS
TYMYFTKGVK LVGVEYAVFC LIAFQGAWHW WREYRTYPAQ QTLP