| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5792 |
|---|
| Symbol | |
|---|
| ID | 8729567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7028958 |
|---|
| End bp | 7030334 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_003390556 |
|---|
| Protein GI | 284040626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.047663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA TACTTACCTT ATTTAGTACG CTCGTTATAA CGGGAGCGTC GTGGGCGCAG
ACGTTTAAAG TGCCGCCCTA TCAAAAATTC AAGCTGAAGA ACGGCCTGAC GGTCTATTTG
ATGGAACAGC ACGAGGTGCC GCTCATCAAT GTATCGGCGG TATTCGATGC GGGTGCGGTG
CAGGATGGAA ACCGGTATGG ACTGGCCAAC ATGACGGCCG ATGCGCTGCT GTTTGGGAGT
TCGAAGTACA CGAAGGCGCA GCTGGAAGAG AAAACCGAAT ACGTTGGCGC AAGTGTAGAC
ACATACGCTG GGAAGGAAGT AGCCAAACTG AGTGCGTCCT TTGCCGTAAA AGATCAGGAC
TTACTGTTCG ATATTATTCA GGACGTACTA ACGAAGCCCA CCTTCGATCA GGGCGAGTTC
GATAAATACA GACAACGCCA ACTGCTACAG TTGACCCAAC AGAAAGAAAG TCCGAGGGGC
GTGGTGGGGT CGTACTTTAA CAAATTCGTG TTTGAGGGCC ACCCATACGC CAATCCGCTA
ACCGGCACGC CTAATTCGGT ATCGGCCATA TCGGCAAATG ATGTTCGGCA GTTTTACCAG
AAAAACTTCA CCACCGATCG GGCGGCCATT GCCATCGTGG GCGATTTCAA CACAGCGGCC
ATGAAAAAGC GCATTACCGA CCTGTTTGGC AGTTGGAAAA CGGCACTCGC CACATCCCCT
GCGTTGACCG ACCCAACCGT TGCCTTCGAT AAAAGCCGCG TCCTGCTCGT CAATAAAGAT
GATGCTCGTG AAACAACGTT CCTGATAGGC GGTAAAGGTA TCACACAGAA TAACCCCGAT
TTTATACCCG TCACCGTTGT CAACACCATT CTGGGTGGTC GGTTTACGTC CTGGCTGAAC
GATGCCCTGC GCGTAAATTC CGGTTTGACC TATGGGGCCA GCAGCCGTTT CGGTACTTTC
CGGAAAAGTG GCACCTTTGC TATTTCGACG TTTACAAAAG TCAGTACTAC CACGCAGGCA
ATCGATATGG CCTTGCAGGT GCTCGACAGT CTGCACCGGA CGAGTATTGA CGAGAAAACG
CTTTCGTCGG CTAAAAACTA CGTAAAAGCC GACTTCCCAC CGAGGTATGA GTCGGCTGCT
GAACTAGCCA ATTTGTTGAC GGATATGTTT AGCCTGGGCT TTGATGAATC GTTCATTAAC
AATTTTCAGA AAAACGTCGA TGGACTTACA GTGGCTAAAA CCCGCCAGAT TATCGACCAG
TATTTTCCGA AAGACAAGCT TCAGTTCGTG CTGATTGGCA AAGCGGAAAC CATTCGGGAC
AAGGTGAAGA AATACGGAAC CATCACCGAA AAAGAAATTA AAGCCGAAGG GTTTTAA
|
|---|
| Protein sequence | MKYILTLFST LVITGASWAQ TFKVPPYQKF KLKNGLTVYL MEQHEVPLIN VSAVFDAGAV
QDGNRYGLAN MTADALLFGS SKYTKAQLEE KTEYVGASVD TYAGKEVAKL SASFAVKDQD
LLFDIIQDVL TKPTFDQGEF DKYRQRQLLQ LTQQKESPRG VVGSYFNKFV FEGHPYANPL
TGTPNSVSAI SANDVRQFYQ KNFTTDRAAI AIVGDFNTAA MKKRITDLFG SWKTALATSP
ALTDPTVAFD KSRVLLVNKD DARETTFLIG GKGITQNNPD FIPVTVVNTI LGGRFTSWLN
DALRVNSGLT YGASSRFGTF RKSGTFAIST FTKVSTTTQA IDMALQVLDS LHRTSIDEKT
LSSAKNYVKA DFPPRYESAA ELANLLTDMF SLGFDESFIN NFQKNVDGLT VAKTRQIIDQ
YFPKDKLQFV LIGKAETIRD KVKKYGTITE KEIKAEGF
|
|---|
| |